1MA2

Tachyplesin I Wild type peptide NMR Structure


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESYTachyplesin I peptide at 0.5 mM90%/10% H2O/D2O and 99% D2O with 0.15% TFA, pH 3.00.15%3.01 atm298
22D TOCSYTachyplesin I peptide at 0.5 mM90%/10% H2O/D2O and 99% D2O with 0.15% TFA, pH 3.00.15%3.01 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
NMR Refinement
MethodDetailsSoftware
simulated annealing with complete cross validationCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number300
Conformers Submitted Total Number31
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
Details2D experiments were collected both in pure D2O and 9:1 H2O:D2O. To resolve overlap, two temperatures were used, 277K and 298K, and NOE restraints from both temperatures were used in the refinement process.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.0Brunger, Adams, Clore, DeLano, Gros, Grosse-Kunstleve, Jiang, Kuszewski, Nilges, Pannu, Read, Rice, Simonson, Warren
2collectionXwinNMR6.1Bruker
3processingXwinNMR6.1Bruker
4refinementCNS1.0Brunger, Adams, Clore, DeLano, Gros, Grosse-Kunstleve, Jiang, Kuszewski, Nilges, Pannu, Read, Rice, Simonson, Warren