1M2F

Solution structure of the N-terminal domain of Synechococcus elongatus KaiA (KaiA135N); Family of 25 structures


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNHA3mM KaiA135N U-15N; 50mM sodium chloride; 20mM phosphate buffer95% H2O/5% D2O0.177.0ambient298
24D_13C/15N-separated_NOESY3mM KaiA135N U-15N,13C; 50mM sodium chloride; 20mM phosphate buffer95% H2O/5% D2O0.177.0ambient298
34D_13C-separated_NOESY3mM KaiA135N U-15N,13C; 50mM sodium chloride; 20mM phosphate buffer100% D2O0.177.0ambient298
4HNHB3mM KaiA135N U-15N; 50mM sodium chloride; 20mM phosphate buffer95% H2O/5% D2O0.177.0ambient298
5HAHB3mM KaiA135N U-15N,13C; 50mM sodium chloride; 20mM phosphate buffer100% D2O0.177.0ambient298
6BRCTCO/BRCTCN3mM KaiA135N U-15N,13C; 50mM sodium chloride; 20mM phosphate buffer100% D2O0.177.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
Distance geometry, Simulated annealing regularization, Simulated annealing refinementThe structures are based on 2034 restraints: 1816 are NOE-derived distance constraints, 187 dihedral angle restraints, 31 distance restraints from hydrogen bondsVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number25
Representative Model2 (closest to the average)
Additional NMR Experimental Information
DetailsSubmission corresponds to family of 25-low-energy-structures. The 1H, 15N and 13C chemical shifts of KaiA135N are deposited at the BMRB database (http://www.bmrb.wisc.edu) under the accession number 5031.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1bVarian Associates
2processingNMRPipe1.8 Rev 2001.030.21.27Delaglio
3data analysisPIPP4.2.6Garrett
4refinementX-PLOR3.851Brunger