1LXF

Structure of the Regulatory N-domain of Human Cardiac Troponin C in Complex with Human Cardiac Troponin-I(147-163) and Bepridil


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
23D_15N-separated_DIPSI1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
3HCCH-TOCSY1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
43D_13C,15N-separated-NOESY1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
5CBCACONNH1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
6HNCACB1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
72D_13C, 15N-filtered NOESY1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
82D_13C, 15N-filtered DIPSI1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
93D_13C, 15N-filtered, edited NOESY1mM cNTnC, 3mM cTnI147-163, 1.5mM bepridil, 5mM DTT, 100mM KCl, 10mM IMDZ, trace amount of NaN3, 50uM DSS, 90% H2O, 10% D2O90% H2O/10% D2O0.16.7ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUnity Inova500
2VarianUNITY600
3VarianUNITYPLUS800
NMR Refinement
MethodDetailsSoftware
simulated annealingA total of 1169 NOE restraints, 88 dihedral angle restraints used for the refinement of cNTnC, 30 NOE restraints used between cNTnC and cTnI147-163, 28 NOE restraints used between cNTnC and bepridil, 24 intramolecular NOE restraints and 12 dihedral angle restraints used within cTnI147-163.NMRPipe
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number30
Conformers Submitted Total Number30
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.1Delaglio, Frank
2data analysisNMRView5.0.4Johnson, Bruce
3refinementX-PLOR3.85Brunger