1KFP

Solution structure of the antimicrobial 18-residue gomesin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1DQF-COSY3.3mM Gomesin90% H2O/10% D2O3.5ambient278
22D NOESY3.3mM Gomesin90% H2O/10% D2O3.5ambient278
3clean-TOCSY3.3mM Gomesin90% H2O/10% D2O3.5ambient278
42D NOESY3.3mM Gomesin100% D2O3.5ambient278
5Clean-TOCSY3.3mM Gomesin100% D2O3.5ambient278
62D NOESY3.3mM Gomesin90% H2O/10% D2O3.5ambient285
7Clean-TOCSY3.3mM Gomesin90% H2O/10% D2O3.5ambient285
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
distance geometry simulated annealing energy minimizationThe 20 structures are based on a total of 289 restraints, 279 are NOE-derived distance constraints, 4 are used for hydrogen bonds modelling and 6 (i.e. 2x3) are used for disulfide bridge modelling. No dihedral angle restraints used.DYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Additional NMR Experimental Information
DetailsThis solution structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDYANA1.5Guentert
2refinementX-PLOR3.1Brunger
3processingVNMR6.1Varian, Inc.