1KBH

Mutual Synergistic Folding in the Interaction Between Nuclear Receptor Coactivators CBP and ACTR


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY3mM U-15N,13C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 100%D2O60 mM6.6ambient31
24D_13C-separated_NOESY3mM U-15N,13C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 95%H2O,5%D2O60 mM6.6ambient31
33D_15N-separated_NOESY3mM U-15N,12C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 95%H2O,5%D2O60 mM6.6ambient31
412C-filtered/13C-edited-NOESY3mM U-15N,13C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 100%D2O60 mM6.6ambient31
5HNHA3mM U-15N,12C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 95%H2O,5%D2O60 mM6.6ambient31
6HNHB3mM U-15N,12C-CBP:2059-2117 6mM 14N,12C-ACTR:1018-108810 mM Tris, 50 mM NaCl 95%H2O,5%D2O60 mM6.6ambient31
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerAMX500
3BrukerDMX750
4BrukerDRX800
5BrukerAMX600
NMR Refinement
MethodDetailsSoftware
Dyana, Sane, Amber200 structures originally calculated using unambiguous restraints in Dyana followed by the addition of ambiguous restraints for simulated annealing of the top 100 Dyana structures in Amber. Best 20 structures selected to represent the structure of the ACTR/CBP complex.DYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations,lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementDYANA1.5Wuthrich, et al.
2processingNMRPipe1Delagio, et al.
3collectionXwinNMR1Bruker
4collectionUXNMR1Bruker
5refinementAmber5.0Case, et al.
6data analysisNMRView3.0Johnson, B., et al.