1K7E

CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]GLYCINE ACID


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.8PEG 8000, pH 7.80
Crystal Properties
Matthews coefficientSolvent content
2.4850

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 182.651α = 90
b = 59.081β = 94.55
c = 67.3γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 345 mm platePREMIRROR, BENT MIRROR2000-08-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7BEMBL/DESY, HAMBURGBW7B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.335910.05811.33.26-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.488.70.1832.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1QOP2.32027663910.1710.1670.244RANDOM20.513
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.30.152.54-1.22
RMS Deviations
KeyRefinement Restraint Deviation
p_scangle_it8.873
p_scbond_it6.423
p_mcangle_it3.772
p_mcbond_it2.553
p_singtor_nbd0.274
p_chiral_restr0.25
p_xyhbond_nbd0.169
p_bond_d0.051
p_angle_d
p_angle_deg
RMS Deviations
KeyRefinement Restraint Deviation
p_scangle_it8.873
p_scbond_it6.423
p_mcangle_it3.772
p_mcbond_it2.553
p_singtor_nbd0.274
p_chiral_restr0.25
p_xyhbond_nbd0.169
p_bond_d0.051
p_angle_d
p_angle_deg
p_planar_d
p_hb_or_metal_coord
p_plane_restr
p_multtor_nbd
p_xhyhbond_nbd
p_planar_tor
p_staggered_tor
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4943
Nucleic Acid Atoms
Solvent Atoms237
Heterogen Atoms33

Software

Software
Software NamePurpose
CNSrefinement
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
CNSphasing