1I9K
THE RNA I-MOTIF
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 9.8 mM of unlabeled DNA | sodium counterion | 4.3 | ambient | 270 | ||
| 2 | DQF-COSY | 9.8 mM of unlabeled DNA | sodium counterion | 4.3 | ambient | 270 | ||
| 3 | TOCSY | 9.8 mM of unlabeled DNA | sodium counterion | 4.3 | ambient | 270 | ||
| 4 | 31P-1H HETERO-TOCSY | 9.8 mM of unlabeled DNA | sodium counterion | 4.3 | ambient | 270 | ||
| 5 | 13C-1H HSQC | 9.8 mM of unlabeled DNA | sodium counterion | 4.3 | ambient | 270 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| NMR-based simulated annealing | X-PLOR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 1 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | X-PLOR | 3.851 | Brunger, A.T. |
| 2 | processing | Felix | 98 | |
| 3 | collection | VNMR | 6.2 | |
| 4 | data analysis | MOLMOL | 2.4 | |
| 5 | data analysis | Curves | ||
