1I42
NMR STRUCTURE OF THE UBX DOMAIN FROM P47
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | HNCA, HN(CO)CA, CBCA(CO)NH, HBHA(CO)NH, 15N-NOESY | 1mM 13C, 15N-labelled p47 C domain sample | 20mM NaAc buffer pH5.2; 90% H2O, 10% D2O | 5.2 | 1 atm | 302 | ||
| 2 | IPAP-HSQC | 1mM 15N p47 C domain sample | 3% C12E5/hexanol (r=0.96) | 5.2 | 1 atm | 302 | ||
| 3 | 2D NOESY | 1mM p47 C domain sample | 99.9% D2O, pH5.2 | 5.2 | 1 atm | 302 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | AURELIA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum,structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 10 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | AURELIA | 2.1.5 | |
| 2 | processing | NMRPipe | Frank Delaglio | |
| 3 | structure solution | X-PLOR | 3.853 | A. Brunger |
| 4 | data analysis | NMRView | 3.1.1 | Bruce Johnson |
| 5 | processing | XwinNMR | ||
| 6 | refinement | X-PLOR | 3.853 | A. Brunger |
