1FV5

SOLUTION STRUCTURE OF THE FIRST ZINC FINGER FROM THE DROSOPHILA U-SHAPED TRANSCRIPTION FACTOR


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.7mM U-shaped first finger; 95% H2O, 5% D2O95% H2O/5% D2O05.5ambient298
2HNHA0.7mM U-shaped first finger 15N-labelled; 95% H2O, 5% D2O95% H2O/5% D2O05.5ambient298
3HNHB0.7mM U-shaped first finger 15N-labelled; 95% H2O, 5% D2O95% H2O/5% D2O05.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
distance geometry simulated annealing cartesian dynamicsThe structures are based on a total of 356 restraints, 324 are NOE-derived distance constraints and 32 are dihedral angle restraintsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number500
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using 2D homonuclear and heteronuclear techniques on unlabelled and 15N-labelled peptide.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Guenther
2data analysisXEASY1.2Bartels, Xia, Billeter, Guntert, Wuthrich
3structure solutionDYANA1.5Guntert, Mumenthaler, Wuthrich
4refinementCNS1.0Warren, Nilges, Kuszewski, Clore, Brunger