1BQR

REDUCED PSEUDOAZURIN


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16pH 6.0
Crystal Properties
Matthews coefficientSolvent content
1.940

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 56.65α = 90
b = 61.67β = 90
c = 30.42γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293IMAGE PLATERIGAKU RAXIS IIC1995-10-13M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RUH3R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.63090.40.04410.54.413287116.97
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.61.6670.80.1412.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1PZA1.681244968090.50.1730.1840.211RANDOM18.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor22.4
p_staggered_tor16.8
p_special_tor10.6
p_planar_tor4.2
p_scangle_it3.469
p_scbond_it2.224
p_mcangle_it2.094
p_mcbond_it1.414
p_multtor_nbd0.244
p_singtor_nbd0.173
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor22.4
p_staggered_tor16.8
p_special_tor10.6
p_planar_tor4.2
p_scangle_it3.469
p_scbond_it2.224
p_mcangle_it2.094
p_mcbond_it1.414
p_multtor_nbd0.244
p_singtor_nbd0.173
p_xyhbond_nbd0.14
p_chiral_restr0.138
p_planar_d0.03
p_angle_d0.026
p_plane_restr0.0236
p_bond_d0.01
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms913
Nucleic Acid Atoms
Solvent Atoms96
Heterogen Atoms1

Software

Software
Software NamePurpose
MERLOTphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling