1AKB

STRUCTURAL BASIS FOR THE CATALYTIC ACTIVITY OF ASPARTATE AMINOTRANSFERASE K258H LACKING ITS PYRIDOXAL-5'-PHOSPHATE-BINDING LYSINE RESIDUE


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.346.64

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.1α = 90
b = 91.8β = 90
c = 129γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.3101188250.178
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor23.4
p_staggered_tor20.5
p_scangle_it12.4
p_scbond_it8.9
p_mcangle_it6.7
p_mcbond_it5.3
p_planar_tor1.7
p_multtor_nbd0.25
p_xhyhbond_nbd0.2
p_singtor_nbd0.18
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor23.4
p_staggered_tor20.5
p_scangle_it12.4
p_scbond_it8.9
p_mcangle_it6.7
p_mcbond_it5.3
p_planar_tor1.7
p_multtor_nbd0.25
p_xhyhbond_nbd0.2
p_singtor_nbd0.18
p_chiral_restr0.14
p_planar_d0.04
p_angle_d0.036
p_bond_d0.01
p_plane_restr0.01
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3162
Nucleic Acid Atoms
Solvent Atoms312
Heterogen Atoms24

Software

Software
Software NamePurpose
PROLSQrefinement