X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.1PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, 100 MM POTASSIUM ACETATE, 100 MM MES, PH 6.1
Crystal Properties
Matthews coefficientSolvent content
1.8834.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.27α = 90
b = 66.96β = 103.77
c = 69.48γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293AREA DETECTORSIEMENS1996-02-05M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RUH2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8510091.30.0320.03242.82.06295081
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.851.9773.90.0740.0746.71.47

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMIR1.851012926791.30.15115.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor22
p_staggered_tor15.5
p_planar_tor2.9
p_scangle_it2.399
p_mcangle_it1.534
p_scbond_it1.454
p_mcbond_it0.96
p_singtor_nbd0.203
p_multtor_nbd0.201
p_xyhbond_nbd0.199
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor22
p_staggered_tor15.5
p_planar_tor2.9
p_scangle_it2.399
p_mcangle_it1.534
p_scbond_it1.454
p_mcbond_it0.96
p_singtor_nbd0.203
p_multtor_nbd0.201
p_xyhbond_nbd0.199
p_chiral_restr0.166
p_planar_d0.037
p_angle_d0.035
p_bond_d0.018
p_plane_restr0.017
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3855
Nucleic Acid Atoms
Solvent Atoms337
Heterogen Atoms30

Software

Software
Software NamePurpose
PHASESphasing
PROLSQrefinement
XENGENdata reduction
XENGENdata scaling