180D

SEQUENCE-DEPENDENT MICROHETEROGENEITY OF Z-DNA: THE CRYSTAL AND MOLECULAR STRUCTURES OF D(CACGCG).D(CGCGTG) AND D(CGCACG).D(CGTGCG)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.8pH 6.80, VAPOR DIFFUSION, HANGING DROP
Crystal Properties
Matthews coefficientSolvent content
1.6123.71

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 17.75α = 90
b = 17.76β = 90
c = 42.77γ = 120.05
Symmetry
Space GroupP 1 1 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray296DIFFRACTOMETERENRAF-NONIUS CAD4

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.51025300.161
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_bond_it12.76
n_phos_angle_it10.21
n_sugar_angle_it8
n_sugar_bond_it5.5
n_multtor_nbd0.093
n_phos_bond_d0.071
n_phos_bond_angle_d0.07
n_singtor_nbd0.069
n_chiral_restr0.038
n_sugar_bond_angle_d0.026
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_bond_it12.76
n_phos_angle_it10.21
n_sugar_angle_it8
n_sugar_bond_it5.5
n_multtor_nbd0.093
n_phos_bond_d0.071
n_phos_bond_angle_d0.07
n_singtor_nbd0.069
n_chiral_restr0.038
n_sugar_bond_angle_d0.026
n_sugar_bond_d0.01
n_plane_restr0.005
n_bond_d
n_angle_d
n_planar_d
n_hb_or_metal_coord
n_bond_angle_restr
n_dihedral_angle_restr
n_impr_tor
n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms
Nucleic Acid Atoms240
Solvent Atoms21
Heterogen Atoms

Software

Software
Software NamePurpose
NUCLSQrefinement