8W9Z

The cryo-EM structure of the Nicotiana tabacum PEP-PAP


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth a]
DNA-directed RNA polymerase subunit alpha
K [auth I]Fructokinase-like 1, chloroplastic
L [auth i]Fructokinase-like 2, chloroplastic-
M [auth J]Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X2- - -
N [auth K]PAP8(pTAC6)- -
O [auth L]superoxide dismutase -
P [auth M],
Q [auth m]
Thioredoxin-like protein CITRX1, chloroplastic -
R [auth N]UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase-like
S [auth O]Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1-
T [auth P]PAP13(pTAC18)- - -
C [auth B]DNA-directed RNA polymerase subunit beta
D [auth C]DNA-directed RNA polymerase subunit gamma
E [auth c]DNA-directed RNA polymerase subunit beta''
F [auth D]PAP1(pTAC3)---
G [auth E]Pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like-
H [auth F]Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like -
I [auth G]superoxide dismutase - -
J [auth H]Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12-like-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth a]
IPR011773DNA-directed RNA polymerase, alpha subunitFamily
A,
B [auth a]
IPR011262DNA-directed RNA polymerase, insert domainDomain
A,
B [auth a]
IPR011260RNA polymerase, alpha subunit, C-terminalDomain
A,
B [auth a]
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeDomain
A,
B [auth a]
IPR036643DNA-directed RNA polymerase, insert domain superfamilyHomologous Superfamily
A,
B [auth a]
IPR036603RNA polymerase, RBP11-like subunitHomologous Superfamily
K [auth I]IPR011611Carbohydrate kinase PfkBDomain
K [auth I]IPR002173Carbohydrate/purine kinase, PfkB, conserved siteConserved Site
K [auth I]IPR029056Ribokinase-likeHomologous Superfamily
L [auth i]IPR011611Carbohydrate kinase PfkBDomain
L [auth i]IPR029056Ribokinase-likeHomologous Superfamily
M [auth J]IPR036464Rubisco LSMT, substrate-binding domain superfamilyHomologous Superfamily
M [auth J]IPR046341SET domain superfamilyHomologous Superfamily
M [auth J]IPR015353Rubisco LSMT, substrate-binding domainDomain
M [auth J]IPR001214SET domainDomain
N [auth K]IPR044710PLASTID TRANSCRIPTIONALLY ACTIVE protein 6Family
O [auth L]IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyHomologous Superfamily
O [auth L]IPR001189Manganese/iron superoxide dismutaseFamily
O [auth L]IPR019833Manganese/iron superoxide dismutase, binding siteBinding Site
O [auth L]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
O [auth L]IPR019831Manganese/iron superoxide dismutase, N-terminalDomain
O [auth L]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
P [auth M],
Q [auth m]
IPR044182Thioredoxin-like protein CITRX, chloroplasticFamily
P [auth M],
Q [auth m]
IPR013766Thioredoxin domainDomain
P [auth M],
Q [auth m]
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
R [auth N]IPR004101Mur ligase, C-terminalDomain
R [auth N]IPR035911MurE/MurF, N-terminalHomologous Superfamily
R [auth N]IPR036565Mur-like, catalytic domain superfamilyHomologous Superfamily
R [auth N]IPR000713Mur ligase, N-terminal catalytic domainDomain
R [auth N]IPR036615Mur ligase, C-terminal domain superfamilyHomologous Superfamily
R [auth N]IPR013221Mur ligase, centralDomain
R [auth N]IPR005761UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligaseFamily
S [auth O]IPR038958Protein plastid transcriptionally active 7Family
T [auth P]IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily
T [auth P]IPR008579(S)-ureidoglycine aminohydrolase, cupin domainDomain
T [auth P]IPR014710RmlC-like jelly roll foldHomologous Superfamily
C [auth B]IPR007642RNA polymerase Rpb2, domain 2Domain
C [auth B]IPR015712DNA-directed RNA polymerase, subunit 2Family
C [auth B]IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyHomologous Superfamily
C [auth B]IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyHomologous Superfamily
C [auth B]IPR037034RNA polymerase Rpb2, domain 2 superfamilyHomologous Superfamily
C [auth B]IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainDomain
C [auth B]IPR007121RNA polymerase, beta subunit, conserved siteConserved Site
C [auth B]IPR007645RNA polymerase Rpb2, domain 3Domain
C [auth B]IPR014724RNA polymerase Rpb2, OB-foldHomologous Superfamily
C [auth B]IPR010243DNA-directed RNA polymerase beta subunit, bacterial-typeFamily
C [auth B]IPR007641RNA polymerase Rpb2, domain 7Domain
D [auth C]IPR045867DNA-directed RNA polymerase, subunit beta-primeFamily
D [auth C]IPR034678DNA-directed RNA polymerase subunit RpoC1Family
D [auth C]IPR042102RNA polymerase Rpb1, domain 3 superfamilyHomologous Superfamily
D [auth C]IPR000722RNA polymerase, alpha subunitDomain
D [auth C]IPR044893RNA polymerase Rpb1, clamp domain superfamilyHomologous Superfamily
D [auth C]IPR006592RNA polymerase, N-terminalDomain
D [auth C]IPR007080RNA polymerase Rpb1, domain 1Domain
E [auth c]IPR007081RNA polymerase Rpb1, domain 5Domain
E [auth c]IPR007083RNA polymerase Rpb1, domain 4Domain
E [auth c]IPR038120RNA polymerase Rpb1, funnel domain superfamilyHomologous Superfamily
E [auth c]IPR012756DNA-directed RNA polymerase, subunit beta''Family
E [auth c]IPR042102RNA polymerase Rpb1, domain 3 superfamilyHomologous Superfamily
G [auth E]IPR002625Smr domainDomain
G [auth E]IPR033443Pentacotripeptide-repeat region of PRORPDomain
G [auth E]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
G [auth E]IPR002885Pentatricopeptide repeatRepeat
H [auth F]IPR003029S1 domainDomain
H [auth F]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth F]IPR044967Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10Family
I [auth G]IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyHomologous Superfamily
I [auth G]IPR001189Manganese/iron superoxide dismutaseFamily
I [auth G]IPR019833Manganese/iron superoxide dismutase, binding siteBinding Site
I [auth G]IPR019832Manganese/iron superoxide dismutase, C-terminalDomain
I [auth G]IPR019831Manganese/iron superoxide dismutase, N-terminalDomain
I [auth G]IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyHomologous Superfamily
J [auth H]IPR034581Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12Family