8T1X
T4 highly immunogenic outer capsid protein C-terminal domain bound to the vertex-proximal gp23* capsomer of the isometric head in two preferred orientations
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | F_UNCLASSIFIED | e8t1xA1 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth A] | PF07068 | e8t1xA2 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
H [auth F] | F_UNCLASSIFIED | e8t1xF1 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth F] | PF07068 | e8t1xF2 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
D [auth B] | F_UNCLASSIFIED | e8t1xB1 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth B] | PF07068 | e8t1xB2 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
E [auth C] | F_UNCLASSIFIED | e8t1xC1 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth C] | PF07068 | e8t1xC2 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
F [auth D] | F_UNCLASSIFIED | e8t1xD2 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth D] | PF07068 | e8t1xD1 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
G [auth E] | F_UNCLASSIFIED | e8t1xE1 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth E] | PF07068 | e8t1xE2 | A: a+b three layers | X: Thioredoxin-like | H: Major capsid protein gp5 (From Topology) | T: Major capsid protein gp5 | F: PF07068 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07068 | Major capsid protein Gp23 (Gp23) | Major capsid protein Gp23 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth X], B [auth Y] | Highly immunogenic outer capsid protein | - | - | |
Mature major capsid protein gp23* | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X], B [auth Y] | IPR038998 | Highly immunogenic outer capsid protein | Family |
A [auth X], B [auth Y] | IPR035986 | PKD domain superfamily | Homologous Superfamily |
A [auth X], B [auth Y] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth X], B [auth Y] | IPR022409 | PKD/Chitinase domain | Domain |
A [auth X], B [auth Y] | IPR000601 | PKD domain | Domain |
A [auth X], B [auth Y] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A [auth X], B [auth Y] | IPR007110 | Immunoglobulin-like domain | Domain |
IPR010762 | Capsid protein, T4-like bacteriophage-like | Family | |
IPR038997 | Major capsid protein, Myoviridae | Family |