8SPI
Crystal structure of chimeric omicron RBD (strain XBB.1.5) complexed with human ACE2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Metalloproteases (zincins) catalytic domain | 8037105 | 3001975 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Metalloproteases (zincins) catalytic domain | 8037105 | 3001975 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8041894 | 3001706 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8041894 | 3001706 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF01401 | e8spiB1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF01401 | ECOD (1.6) |
A | PF01401 | e8spiA1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF01401 | ECOD (1.6) |
C [auth E] | PF09408 | e8spiE1 | A: a+b three layers | X: Coronavirus spike protein receptor-binding domain (From Homology) | H: Coronavirus spike protein receptor-binding domain | T: Beta-coronavirus spike protein receptor-binding domain | F: PF09408 | ECOD (1.6) |
D [auth F] | PF09408 | e8spiF1 | A: a+b three layers | X: Coronavirus spike protein receptor-binding domain (From Homology) | H: Coronavirus spike protein receptor-binding domain | T: Beta-coronavirus spike protein receptor-binding domain | F: PF09408 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01401 | Angiotensin-converting enzyme (Peptidase_M2) | Angiotensin-converting enzyme | - | Family | |