8PPU
Pyrococcus abyssi DNA polymerase D (PolD) in its editing mode bound to a primer/template substrate containing three consecutive mismatches
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8053391 | 3000135 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Metallo-dependent phosphatases | 8053389 | 3001067 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055689 | 3001330 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF00149 | Calcineurin-like phosphoesterase (Metallophos) | Calcineurin-like phosphoesterase | This family includes a diverse range of phosphoesterases [1], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD Swiss:P13457 or ... | Domain |
D [auth C], E [auth D], F [auth E] | PF02747 | Proliferating cell nuclear antigen, C-terminal domain (PCNA_C) | Proliferating cell nuclear antigen, C-terminal domain | N-terminal and C-terminal domains of PCNA are topologically identical. Three PCNA molecules are tightly associated to form a closed ring encircling duplex DNA. | Domain |
D [auth C], E [auth D], F [auth E] | PF00705 | Proliferating cell nuclear antigen, N-terminal domain (PCNA_N) | Proliferating cell nuclear antigen, N-terminal domain | N-terminal and C-terminal domains of PCNA are topologically identical. Three PCNA molecules are tightly associated to form a closed ring encircling duplex DNA. | Domain |
G [auth B] | PF03833 | DNA polymerase II large subunit DP2 (PolC_DP2) | DNA polymerase II large subunit DP2 | - | Family |