8P97
BtuB3G3 bound to cyanocobalamin with disordered EL8
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e8p97A1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Ligand-gated protein channel | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF07715 | e8p97A2 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: TonB-dependent receptor plug domain (From Topology) | T: TonB-dependent receptor plug domain | F: PF07715 | ECOD (1.6) |
B | PF16819 | e8p97B1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF16819 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07715 | TonB-dependent Receptor Plug Domain (Plug) | TonB-dependent Receptor Plug Domain | The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors ([1]). It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens ... | Domain | |
PF16819 | Domain of unknown function (DUF5074) (DUF5074) | Domain of unknown function (DUF5074) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039426 | TonB-dependent receptor-like | Family | |
IPR037066 | TonB-dependent receptor, plug domain superfamily | Homologous Superfamily | |
IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | Homologous Superfamily | |
IPR012910 | TonB-dependent receptor, plug domain | Domain | |
IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily | Homologous Superfamily | |
IPR031815 | Protein of unknown function DUF5074 | Family | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |