8IYT

Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00155	Aminotransferase class I and II (Aminotran_1_2)	Aminotransferase class I and II	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Serine palmitoyltransferase	C-palmitoyltransferase activity acyltransferase activity serine C-palmitoyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity C-acyltransferase activity catalytic activity palmitoyltransferase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding organic cyclic compound binding C-palmitoyltransferase activity acyltransferase activity serine C-palmitoyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity C-acyltransferase activity catalytic activity palmitoyltransferase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding organic cyclic compound binding anion binding heterocyclic compound binding small molecule binding 8-amino-7-oxononanoate synthase activity	sphingolipid biosynthetic process cellular biosynthetic process organic hydroxy compound metabolic process organonitrogen compound biosynthetic process lipid biosynthetic process alcohol metabolic process diol biosynthetic process organic substance metabolic process diol metabolic process organic substance biosynthetic process polyol biosynthetic process small molecule metabolic process membrane lipid metabolic process sphingoid biosynthetic process sphingolipid biosynthetic process cellular biosynthetic process organic hydroxy compound metabolic process organonitrogen compound biosynthetic process lipid biosynthetic process alcohol metabolic process diol biosynthetic process organic substance metabolic process diol metabolic process organic substance biosynthetic process polyol biosynthetic process small molecule metabolic process membrane lipid metabolic process sphingoid biosynthetic process polyol metabolic process organonitrogen compound metabolic process small molecule biosynthetic process cellular metabolic process sphingolipid metabolic process primary metabolic process sphingosine metabolic process sphingoid metabolic process sphingosine biosynthetic process biosynthetic process organic hydroxy compound biosynthetic process cellular lipid metabolic process alcohol biosynthetic process metabolic process cellular process membrane lipid biosynthetic process lipid metabolic process ceramide metabolic process amide biosynthetic process ceramide biosynthetic process amide metabolic process	cell periphery plasma membrane membrane cellular anatomical entity intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A	IPR001917	Aminotransferase, class-II, pyridoxal-phosphate binding site	Binding Site
A	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A	IPR004839	Aminotransferase, class I/classII	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.