8G5F

Native GABA-A receptor from the mouse brain, ortho-alpha1-alpha3-beta2-gamma2 subtype, in complex with GABA and allopregnanolone


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF02931e8g5fA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
APF02932e8g5fA1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
BPF02931e8g5fB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
BPF02932e8g5fB1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
EPF02931e8g5fE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
EPF02932e8g5fE2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
CPF02931e8g5fC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
CPF02932e8g5fC1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
DPF02931e8g5fD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
DPF02932e8g5fD2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
F [auth J]PF07686e8g5fJ1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
G [auth K]PF07686e8g5fK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
F [auth J]Heavy ChainIGHV1 -gamma-aminobutyric acid receptor subunit alpha-1SAbDab (2024-05-03)
G [auth K]Light ChainIGKV6 Kappagamma-aminobutyric acid receptor subunit alpha-1SAbDab (2024-05-03)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Gamma-aminobutyric acid receptor subunit alpha-3
B, E
Gamma-aminobutyric acid receptor subunit beta-2
Gamma-aminobutyric acid receptor subunit alpha-1
Gamma-aminobutyric acid receptor subunit gamma-2
F [auth J]Heavy Chain of 8E3 Fab---
G [auth K]Light Chain of 8E3 Fab---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
IPR005433Gamma-aminobutyric-acid A receptor, alpha 3 subunitFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
IPR006201Neurotransmitter-gated ion-channelFamily
B, E
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
B, E
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
B, E
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
B, E
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
B, E
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
B, E
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
B, E
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
B, E
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
B, E
IPR006201Neurotransmitter-gated ion-channelFamily
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
IPR006201Neurotransmitter-gated ion-channelFamily
IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily