Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03178,PF10433e8bumA2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
APF10433e8bumA3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
APF03178e8bumA1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
DPF03178,PF10433e8bumD2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
DPF10433e8bumD1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
DPF03178e8bumD3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
GPF03178,PF10433e8bumG2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
GPF10433e8bumG1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
GPF03178e8bumG3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
BPF00069e8bumB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
EPF00069e8bumE1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
HPF00069e8bumH1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
CPF00134e8bumC2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
CPF21797e8bumC1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)
FPF00134e8bumF1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
FPF21797e8bumF2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)
IPF00134e8bumI1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
IPF21797e8bumI2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D, G
PF10433Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N)Mono-functional DNA-alkylating methyl methanesulfonate N-term- Repeat
A, D, G
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
B, E, H
PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain
C, F, I
PF00134Cyclin, N-terminal domain (Cyclin_N)Cyclin, N-terminal domainCyclins regulate cyclin dependent kinases (CDKs). Swiss:P22674 is a Uracil-DNA glycosylase that is related to other cyclins [4]. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the N-terminal domain.Domain
C, F, I
PF21797Cyclin-T2-like, C-terminal domain (CycT2-like_C)Cyclin-T2-like, C-terminal domainThis domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P ...This domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P-TEFB). This domain adopts s cyclin box fold consisting of five helices and a short C-terminal helix [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D, G
DNA damage-binding protein 1
B, E, H
Cyclin-dependent kinase 12
C, F, I
Cyclin-K

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B, E, H
TPO Parent Component: THR

RESIDAA0038

PSI-MOD :  O-phospho-L-threonine MOD:00047