8BE5
Crystal structure of SOS1-KRasG12V-Nanobody22-Nanobody75
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth AAZA] | SCOP2B Superfamily | ENTH/VHS domain-like | 8057961 | 3000164 | SCOP2B (2022-06-29) |
A [auth AAZA] | SCOP2B Superfamily | Ras GEF | 8057967 | 3000128 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAZA] | PF00617,PF00618 | e8be5AAZA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ras GEF (From Topology) | T: Ras GEF | F: PF00617,PF00618 | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e8be5C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth R] | PF00071 | e8be5R1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00071 | ECOD (1.6) |
D [auth N] | PF07686 | e8be5N1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth C] | Heavy Chain | IGHV1 | - | unknown | isoform 2b of gtpase kras | SAbDab (2024-05-31) |
D [auth N] | Heavy Chain | IGHV1 | - | - | SAbDab (2024-05-31) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAZA] | IPR000219 | Dbl homology (DH) domain | Domain |
A [auth AAZA] | IPR008937 | Ras-like guanine nucleotide exchange factor | Family |
A [auth AAZA] | IPR019804 | Ras guanine-nucleotide exchange factor, conserved site | Conserved Site |
A [auth AAZA] | IPR036964 | Ras guanine-nucleotide exchange factor, catalytic domain superfamily | Homologous Superfamily |
A [auth AAZA] | IPR035899 | Dbl homology (DH) domain superfamily | Homologous Superfamily |
A [auth AAZA] | IPR023578 | Ras guanine nucleotide exchange factor domain superfamily | Homologous Superfamily |
A [auth AAZA] | IPR001849 | Pleckstrin homology domain | Domain |
A [auth AAZA] | IPR000651 | Ras-like guanine nucleotide exchange factor, N-terminal | Domain |
A [auth AAZA] | IPR011993 | PH-like domain superfamily | Homologous Superfamily |
A [auth AAZA] | IPR001895 | Ras guanine-nucleotide exchange factors catalytic domain | Domain |
A [auth AAZA] | IPR009072 | Histone-fold | Homologous Superfamily |