8ARH

In situ subtomogram average of Vaccinia virus (WR) D13 lattice, on immature virions

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF03340	e8arhA3	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
A	PF03340	e8arhA1	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)
B	PF03340	e8arhB2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
B	PF03340	e8arhB1	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)
C	PF03340	e8arhC3	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
C	PF03340	e8arhC1	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)
D	PF03340	e8arhD2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
D	PF03340	e8arhD3	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)
E	PF03340	e8arhE2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
E	PF03340	e8arhE3	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)
F	PF03340	e8arhF2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF03340	ECOD (1.6)
F	PF03340	e8arhF3	A: a+b complex topology	X: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	H: Insertion domain in vaccinia virus scaffolding protein D13 (From Topology)	T: Insertion domain in vaccinia virus scaffolding protein D13	F: PF03340	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF03340	Poxvirus rifampicin resistance protein (Pox_Rif)	Poxvirus rifampicin resistance protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Scaffold protein D13	identical protein binding protein binding binding	response to stimulus response to chemical response to antibiotic	membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR005008	Poxvirus rifampicin-resistance	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.