8AA1
Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF07980,PF14322 | e8aa1B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF07980,PF14322 | ECOD (1.6) |
C [auth J] | PF07980,PF14322 | e8aa1J1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF07980,PF14322 | ECOD (1.6) |
B [auth A] | PF00593 | e8aa1A2 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Ligand-gated protein channel | F: PF00593 | ECOD (1.6) |
B [auth A] | PF07715 | e8aa1A1 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: TonB-dependent receptor plug domain (From Topology) | T: TonB-dependent receptor plug domain | F: PF07715 | ECOD (1.6) |
D [auth I] | PF00593 | e8aa1I2 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Ligand-gated protein channel | F: PF00593 | ECOD (1.6) |
D [auth I] | PF07715 | e8aa1I1 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: TonB-dependent receptor plug domain (From Topology) | T: TonB-dependent receptor plug domain | F: PF07715 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], C [auth J] | PF07980 | SusD family (SusD_RagB) | SusD family | - | Repeat |
A [auth B], C [auth J] | PF14322 | Starch-binding associating with outer membrane (SusD-like_3) | Starch-binding associating with outer membrane | - | Repeat |
B [auth A], D [auth I] | PF00593 | TonB dependent receptor-like, beta-barrel (TonB_dep_Rec_b-barrel) | TonB dependent receptor-like, beta-barrel | This entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1]. | Domain |
B [auth A], D [auth I] | PF07715 | TonB-dependent Receptor Plug Domain (Plug) | TonB-dependent Receptor Plug Domain | The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors ([1]). It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], C [auth J] | SusD homolog | - | ||
B [auth A], D [auth I] | SusC homolog | - |
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |