7UPN
Maedi visna virus Vif in complex with CypA and E3 ubiquitin ligase
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2022-06-29) |
D [auth H] | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00160 | e7upnA1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
E [auth B] | PF00160 | e7upnB1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
C [auth E] | PF03931 | e7upnE1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF03931 | ECOD (1.6) |
G | PF03931 | e7upnG1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF03931 | ECOD (1.6) |
D [auth H] | PF00240 | e7upnH1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
H [auth I] | PF00240 | e7upnI1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth B] | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain |
C [auth E], G | PF03931 | Skp1 family, tetramerisation domain (Skp1_POZ) | Skp1 family, tetramerisation domain | - | Domain |
D [auth H], H [auth I] | PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, E [auth B] | IPR029000 | Cyclophilin-like domain superfamily | Homologous Superfamily |
A, E [auth B] | IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Domain |
A, E [auth B] | IPR024936 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase | Family |
A, E [auth B] | IPR020892 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Conserved Site |
B [auth C], F | IPR009979 | Bovine Lentivirus VIF | Family |
C [auth E], G | IPR016073 | SKP1 component, POZ domain | Domain |
C [auth E], G | IPR001232 | S-phase kinase-associated protein 1-like | Family |
C [auth E], G | IPR039948 | Elongin-C | Family |
C [auth E], G | IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily |
D [auth H], H [auth I] | IPR000626 | Ubiquitin-like domain | Domain |
D [auth H], H [auth I] | IPR039049 | Elongin B | Family |
D [auth H], H [auth I] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |