7TRC
Human telomerase H/ACA RNP at 3.3 Angstrom
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth K] | PF00400 | e7trcK1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
B [auth G] | PF01472 | e7trcG2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PF01472 | ECOD (1.6) |
B [auth G] | PF01509,PF08068,PF16198 | e7trcG1 | A: a+b two layers | X: Alpha-beta plaits | H: Pseudouridine synthase (From Topology) | T: Pseudouridine synthase | F: PF01509,PF08068,PF16198 | ECOD (1.6) |
J [auth C] | PF01472 | e7trcC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PF01472 | ECOD (1.6) |
J [auth C] | PF01509,PF08068,PF16198 | e7trcC2 | A: a+b two layers | X: Alpha-beta plaits | H: Pseudouridine synthase (From Topology) | T: Pseudouridine synthase | F: PF01509,PF08068,PF16198 | ECOD (1.6) |
C [auth J] | PF04135 | e7trcJ1 | A: few secondary structure elements | X: Rubredoxin-like | H: Nucleolar RNA-binding protein Nop10-like (From Topology) | T: Nucleolar RNA-binding protein Nop10-like | F: PF04135 | ECOD (1.6) |
H [auth F] | PF04135 | e7trcF1 | A: few secondary structure elements | X: Rubredoxin-like | H: Nucleolar RNA-binding protein Nop10-like (From Topology) | T: Nucleolar RNA-binding protein Nop10-like | F: PF04135 | ECOD (1.6) |
E [auth H] | PF04410 | e7trcH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF04410 | ECOD (1.6) |
G [auth D] | PF04410 | e7trcD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF04410 | ECOD (1.6) |
F [auth I] | PF01248 | e7trcI1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
I [auth E] | PF01248 | e7trcE1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth K] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
B [auth G], J [auth C] | PF08068 | DKCLD (NUC011) domain (DKCLD) | DKCLD (NUC011) domain | This is a TruB_N/PUA domain associated N-terminal domain of Dyskerin-like proteins [1]. | Domain |
B [auth G], J [auth C] | PF16198 | tRNA pseudouridylate synthase B C-terminal domain (TruB_C_2) | tRNA pseudouridylate synthase B C-terminal domain | - | Family |
B [auth G], J [auth C] | PF01509 | TruB family pseudouridylate synthase (N terminal domain) (TruB_N) | TruB family pseudouridylate synthase (N terminal domain) | - | Family |
B [auth G], J [auth C] | PF01472 | PUA domain (PUA) | PUA domain | - | Family |
C [auth J], H [auth F] | PF04135 | Nucleolar RNA-binding protein, Nop10p family (Nop10p) | Nucleolar RNA-binding protein, Nop10p family | - | Family |
E [auth H], G [auth D] | PF04410 | Gar1/Naf1 RNA binding region (Gar1) | Gar1/Naf1 RNA binding region | Gar1 is a small nucleolar RNP that is required for pre-mRNA processing and pseudouridylation [1]. It is co-immunoprecipitated with the H/ACA families of snoRNAs. This family represents the conserved central region of Gar1. This region is necessary an ... | Domain |
F [auth I], I [auth E] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |