7TBP
X-ray structure of the HIV-1 myristoylated matrix protein
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00540 | e7tbpB1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
B [auth A] | PF00540 | e7tbpA1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
C | PF00540 | e7tbpC1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C | PF00540 | gag gene protein p17 (matrix protein) (Gag_p17) | gag gene protein p17 (matrix protein) | The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C | IPR000071 | Immunodeficiency lentiviral matrix, N-terminal | Domain |
A [auth B], B [auth A], C | IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain |
A [auth B], B [auth A], C | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
A [auth B], B [auth A], C | IPR001878 | Zinc finger, CCHC-type | Domain |
A [auth B], B [auth A], C | IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
A [auth B], B [auth A], C | IPR010999 | Retroviral matrix protein | Homologous Superfamily |
A [auth B], B [auth A], C | IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily |
A [auth B], B [auth A], C | IPR014817 | Gag protein p6 | Domain |
A [auth B], B [auth A], C | IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |