7PVD
Structure of the membrane soluble spike complex from the Lassa virus in a C1-symmetric map focused on the ectodomain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth A] | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
F [auth C] | SCOP2B Superfamily | Lassa virus GP1 subunit receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth a] | PF00798 | e7pvda1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
B [auth b] | PF00798 | e7pvdb1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
C [auth c] | PF00798 | e7pvdc1 | A: a+b complex topology | X: Arenavirus glycoprotein GP2 (From Topology) | H: Arenavirus glycoprotein GP2 (From Topology) | T: Arenavirus glycoprotein GP2 | F: PF00798 | ECOD (1.6) |
D [auth A] | PF00798 | e7pvdA1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
E [auth B] | PF00798 | e7pvdB1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
F [auth C] | PF00798 | e7pvdC1 | A: a+b complex topology | X: Envelope glycoprotein GP1 (From Topology) | H: Envelope glycoprotein GP1 (From Topology) | T: Envelope glycoprotein GP1 | F: PF00798 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth a], B [auth b], C [auth c] | PF00798 | Arenavirus glycoprotein (Arena_glycoprot) | Arenavirus glycoprotein | - | Family |
D [auth A], E [auth B], F [auth C] | PF00798 | Arenavirus glycoprotein (Arena_glycoprot) | Arenavirus glycoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth a], B [auth b], C [auth c] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
A [auth a], B [auth b], C [auth c] | IPR001535 | Arenavirus glycoprotein | Family |
D [auth A], E [auth B], F [auth C] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
D [auth A], E [auth B], F [auth C] | IPR001535 | Arenavirus glycoprotein | Family |