7L6N
The Mycobacterium tuberculosis ClpB disaggregase hexamer structure with three locally refined ClpB middle domains and three DnaK nucleotide binding domains
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
H [auth I] | PF00012 | e7l6nI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00012 | ECOD (1.6) |
I [auth J] | PF00012 | e7l6nJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00012 | ECOD (1.6) |
J [auth K] | PF00012 | e7l6nK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00012 | ECOD (1.6) |
A | PF10431 | e7l6nA3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
A | PF17871 | e7l6nA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
A | PF00004 | e7l6nA4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
A | PF07724 | e7l6nA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
B | PF10431 | e7l6nB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
B | PF17871 | e7l6nB4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
B | PF00004 | e7l6nB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
B | PF07724 | e7l6nB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
C | PF10431 | e7l6nC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
C | PF17871 | e7l6nC4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
C | PF00004 | e7l6nC2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
C | PF07724 | e7l6nC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
D | PF10431 | e7l6nD4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
D | PF17871 | e7l6nD3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
D | PF00004 | e7l6nD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
D | PF07724 | e7l6nD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
E | PF10431 | e7l6nE3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
E | PF17871 | e7l6nE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
E | PF00004 | e7l6nE4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
E | PF07724 | e7l6nE2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
F | PF10431 | e7l6nF3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF10431 | ECOD (1.6) |
F | PF17871 | e7l6nF2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17871 | ECOD (1.6) |
F | PF00004 | e7l6nF4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
F | PF07724 | e7l6nF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07724 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
H [auth I], I [auth J], J [auth K] | PF00012 | Hsp70 protein (HSP70) | Hsp70 protein | - | Family |
PF10431 | C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) | C-terminal, D2-small domain, of ClpB protein | This is the C-terminal domain of ClpB protein, referred to as the D2-small domain, and is a mixed alpha-beta structure. Compared with the D1-small domain (included in AAA, Pfam:PF00004) it lacks the long coiled-coil insertion, and instead of helix C4 ... | Domain | |
PF17871 | AAA lid domain (AAA_lid_9) | AAA lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
PF07724 | AAA domain (Cdc48 subfamily) (AAA_2) | AAA domain (Cdc48 subfamily) | This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. | Domain | |