7E8B
CryoEM structure of human Kv4.2-DPP6S complex
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth L] | SCOP2B Superfamily | alpha/beta-Hydrolases | 8043867 | 3000102 | SCOP2B (2022-06-29) |
A [auth L] | SCOP2B Superfamily | DPP6 N-terminal domain-like | 8043865 | 3001705 | SCOP2B (2022-06-29) |
B [auth K] | SCOP2B Superfamily | alpha/beta-Hydrolases | 8043867 | 3000102 | SCOP2B (2022-06-29) |
B [auth K] | SCOP2B Superfamily | DPP6 N-terminal domain-like | 8043865 | 3001705 | SCOP2B (2022-06-29) |
E [auth J] | SCOP2B Superfamily | DPP6 N-terminal domain-like | 8043865 | 3001705 | SCOP2B (2022-06-29) |
E [auth J] | SCOP2B Superfamily | alpha/beta-Hydrolases | 8043867 | 3000102 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | alpha/beta-Hydrolases | 8043867 | 3000102 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | DPP6 N-terminal domain-like | 8043865 | 3001705 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth B] | PF00520 | e7e8bB2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF00520 | ECOD (1.6) |
C [auth B] | PF02214 | e7e8bB1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF02214 | ECOD (1.6) |
G [auth D] | PF00520 | e7e8bD2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF00520 | ECOD (1.6) |
G [auth D] | PF02214 | e7e8bD1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF02214 | ECOD (1.6) |
D [auth A] | PF00520 | e7e8bA3 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF00520 | ECOD (1.6) |
D [auth A] | PF02214 | e7e8bA2 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF02214 | ECOD (1.6) |
H [auth C] | PF00520 | e7e8bC1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF00520 | ECOD (1.6) |
H [auth C] | PF02214 | e7e8bC2 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF02214 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth L], B [auth K], E [auth J], F [auth I] | PF00930 | Dipeptidyl peptidase IV (DPP IV) N-terminal region (DPPIV_N) | Dipeptidyl peptidase IV (DPP IV) N-terminal region | - | Repeat |
A [auth L], B [auth K], E [auth J], F [auth I] | PF00326 | Prolyl oligopeptidase family (Peptidase_S9) | Prolyl oligopeptidase family | - | Domain |
C [auth B], G [auth D] | PF02214 | BTB/POZ domain (BTB_2) | BTB/POZ domain | In voltage-gated K+ channels this domain is responsible for subfamily-specific assembly of alpha-subunits into functional tetrameric channels [1]. In KCTD1 (Swiss:Q719H9) this domain functions as a transcriptional repressor [2]. It also mediates homo ... | Domain |
C [auth B], G [auth D] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
D [auth A], H [auth C] | PF02214 | BTB/POZ domain (BTB_2) | BTB/POZ domain | In voltage-gated K+ channels this domain is responsible for subfamily-specific assembly of alpha-subunits into functional tetrameric channels [1]. In KCTD1 (Swiss:Q719H9) this domain functions as a transcriptional repressor [2]. It also mediates homo ... | Domain |
D [auth A], H [auth C] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | KvAP voltage-regulated K channels |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Potassium, Sodium, & Proton Ion-Selective | Kv4.2 Voltage-gated potassium Channel |