7BW6

Varicella-zoster virus capsid

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], MA [auth n], OA [auth p], PA [auth q], RA [auth s], SA [auth t]	PF01802	Herpesvirus VP23 like capsid protein (Herpes_V23)	Herpesvirus VP23 like capsid protein	-	Family
A, B, BA [auth c], D, DA [auth e], A, B, BA [auth c], D, DA [auth e], F, H, J, L, N, P, R, T, V, X, Z [auth a]	PF03122	Herpes virus major capsid protein (Herpes_MCP)	Herpes virus major capsid protein	-	Family
AA [auth b], C, CA [auth d], E, EA [auth f], AA [auth b], C, CA [auth d], E, EA [auth f], G, I, K, M, O, Q, S, U, W, Y	PF04496	Herpesvirus UL35 family (Herpes_UL35)	Herpesvirus UL35 family	-	Family
HA [auth i], KA [auth l], NA [auth o], QA [auth r], TA [auth w]	PF03327	Herpesvirus capsid shell protein VP19C (Herpes_VP19C)	Herpesvirus capsid shell protein VP19C	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], MA [auth n], OA [auth p], PA [auth q], RA [auth s], SA [auth t]	Triplex capsid protein 2	structural molecule activity	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle
A, B, BA [auth c], D, DA [auth e], A, B, BA [auth c], D, DA [auth e], F, H, J, L, N, P, R, T, V, X, Z [auth a]	Major capsid protein	structural molecule activity	-	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle viral capsid icosahedral viral capsid virion component T=16 icosahedral viral capsid
AA [auth b], C, CA [auth d], E, EA [auth f], AA [auth b], C, CA [auth d], E, EA [auth f], G, I, K, M, O, Q, S, U, W, Y	Small capsomere-interacting protein	-	viral process	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle
HA [auth i], KA [auth l], NA [auth o], QA [auth r], TA [auth w]	Triplex capsid protein 1	DNA binding binding organic cyclic compound binding nucleic acid binding	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part host cell part host intracellular region cellular anatomical entity host cell nucleus host intracellular organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], FA [auth g], GA [auth h], IA [auth j], JA [auth k], LA [auth m], MA [auth n], OA [auth p], PA [auth q], RA [auth s], SA [auth t]	IPR002690	Herpesvirus capsid protein 2	Family
A, B, BA [auth c], D, DA [auth e], A, B, BA [auth c], D, DA [auth e], F, H, J, L, N, P, R, T, V, X, Z [auth a]	IPR000912	Herpesvirus major capsid protein	Family
A, B, BA [auth c], D, DA [auth e], A, B, BA [auth c], D, DA [auth e], F, H, J, L, N, P, R, T, V, X, Z [auth a]	IPR023233	Herpesvirus major capsid protein, upper domain superfamily	Homologous Superfamily
AA [auth b], C, CA [auth d], E, EA [auth f], AA [auth b], C, CA [auth d], E, EA [auth f], G, I, K, M, O, Q, S, U, W, Y	IPR007584	Herpesvirus UL35	Family
HA [auth i], KA [auth l], NA [auth o], QA [auth r], TA [auth w]	IPR004999	Herpesvirus capsid shell protein 1	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.