7A01

The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth p2]SCOP2B SuperfamilyRibosomal L38e protein-like8093716 3002206 SCOP2B (2022-06-29)
F [auth k2]SCOP2B Superfamily50S Ribosomal protein L14-like8072048 3000433 SCOP2B (2022-06-29)
H [auth m2]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095966 3000210 SCOP2B (2022-06-29)
I [auth o2]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076754 3000334 SCOP2B (2022-06-29)
J [auth q2]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8097818 3001045 SCOP2B (2022-06-29)
K [auth r2]SCOP2B SuperfamilyRibosomal protein L29e8053037 3002157 SCOP2B (2022-06-29)
L [auth t2]SCOP2B SuperfamilyRibosomal protein L48052829 3001146 SCOP2B (2022-06-29)
L [auth t2]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052828 3002143 SCOP2B (2022-06-29)
N [auth v2]SCOP2B SuperfamilyRibosomal protein L32e8102088 3000982 SCOP2B (2022-06-29)
V [auth D2]SCOP2B SuperfamilyRibosomal protein L39e8095595 3001756 SCOP2B (2022-06-29)
AA [auth I2]SCOP2B SuperfamilyZn-binding ribosomal proteins8101435 3001320 SCOP2B (2022-06-29)
GA [auth S2]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095977 3001045 SCOP2B (2022-06-29)
MA [auth Y2]SCOP2B SuperfamilyRL5-like8073894 3001709 SCOP2B (2022-06-29)
OA [auth 12]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082477 3000210 SCOP2B (2022-06-29)
PA [auth 22]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053047 3000334 SCOP2B (2022-06-29)
RA [auth 42]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8065344 3001911 SCOP2B (2022-06-29)
XA [auth s3]SCOP2 FamilyRibosomal protein S30e-like8102141 4005067 SCOP2 (2022-06-29)
XA [auth s3]SCOP2 SuperfamilyRibosomal protein S30e-like8102142 3002190 SCOP2 (2022-06-29)
YA [auth 13]SCOP2B SuperfamilyL30e-like8094953 3001739 SCOP2B (2022-06-29)
AB [auth G3]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052708 3002138 SCOP2B (2022-06-29)
AB [auth G3]SCOP2B SuperfamilyNucleic acid-binding proteins8052707 3000135 SCOP2B (2022-06-29)
CB [auth a3]SCOP2B SuperfamilyWD40 repeat-like8097816 3001694 SCOP2B (2022-06-29)
DB [auth a5]SCOP2B SuperfamilyTranslational machinery components8097824 3000571 SCOP2B (2022-06-29)
GB [auth U3]SCOP2 FamilyRibosomal protein S2-like8102085 4003744 SCOP2 (2022-06-29)
GB [auth U3]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like8102086 3001397 SCOP2 (2022-06-29)
LB [auth j3]SCOP2B SuperfamilyNucleic acid-binding proteins8052746 3000135 SCOP2B (2022-06-29)
LB [auth j3]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052747 3000334 SCOP2B (2022-06-29)
LB [auth j3]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052745 3001473 SCOP2B (2022-06-29)
NB [auth N3]SCOP2B SuperfamilyRibosomal protein S78095703 3000799 SCOP2B (2022-06-29)
PB [auth B3]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082683 3000100 SCOP2B (2022-06-29)
QB [auth f3]SCOP2B SuperfamilyNucleic acid-binding proteins8095265 3000135 SCOP2B (2022-06-29)
RB [auth F3]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052971 3001284 SCOP2B (2022-06-29)
RB [auth F3]SCOP2B SuperfamilyHomeodomain-like8052970 3000001 SCOP2B (2022-06-29)
SB [auth c3]SCOP2B Superfamily50S Ribosomal protein L14-like8053075 3000433 SCOP2B (2022-06-29)
VB [auth D3]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8101986 3000068 SCOP2B (2022-06-29)
WB [auth e3]SCOP2B SuperfamilyL30e-like8063980 3001739 SCOP2B (2022-06-29)
XB [auth E3]SCOP2B SuperfamilyWinged helix DNA-binding domain8055712 3000034 SCOP2B (2022-06-29)
ZB [auth H5]SCOP2B SuperfamilyWinged helix DNA-binding domain8089322 3000034 SCOP2B (2022-06-29)
BC [auth I3]SCOP2B SuperfamilyRibosomal protein S108102028 3001336 SCOP2B (2022-06-29)
EC [auth M3]SCOP2B SuperfamilyWinged helix DNA-binding domain8090991 3000034 SCOP2B (2022-06-29)
FC [auth O3]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8099546 3000068 SCOP2B (2022-06-29)
P [auth x2]SCOP2B SuperfamilyTranslational proteins8093714 3000811 SCOP2B (2022-06-29)
Q [auth y2]SCOP2B SuperfamilyRibosomal protein L34e-like8053543 3002203 SCOP2B (2022-06-29)
T [auth B2]SCOP2B SuperfamilyRibosomal protein L36e8053119 3002161 SCOP2B (2022-06-29)
Y [auth G2]SCOP2B SuperfamilyTranslational machinery components8052886 3000571 SCOP2B (2022-06-29)
Z [auth H2]SCOP2B SuperfamilyRibosomal protein L228097828 3001078 SCOP2B (2022-06-29)
SA [auth 52]SCOP2B SuperfamilyTranslational proteins8078357 3000811 SCOP2B (2022-06-29)
VA [auth 82]SCOP2B Superfamily60S Ribosomal protein L22e8061156 3002158 SCOP2B (2022-06-29)
BB [auth G5]SCOP2B SuperfamilyS13-like H2TH domain8101439 3000053 SCOP2B (2022-06-29)
HB [auth V3]SCOP2B SuperfamilyRibosomal S3Ae-like8053216 3002166 SCOP2B (2022-06-29)
MB [auth J5]SCOP2B SuperfamilyRibosomal protein S88079081 3000709 SCOP2B (2022-06-29)
YB [auth H3]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052584 3000068 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth p2]PF01781e7a01p21 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
F [auth k2]PF00238e7a01k21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
G [auth l2]PF01246e7a01l21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
H [auth m2]PF00276,PF03939e7a01m21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
I [auth o2]PF16906e7a01o21 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
J [auth q2]PF00828e7a01q21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
K [auth r2]PF01779e7a01r21 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
L [auth t2]PF00573e7a01t22 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
L [auth t2]PF14374e7a01t21 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
N [auth v2]PF01655e7a01v21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
O [auth w2]PF00572e7a01w21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth 92]PF00181e7a01921 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
R [auth 92]PF03947e7a01922 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
S [auth A2]PF00831e7a01A21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
V [auth D2]PF00832e7a01D21 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
W [auth E2]PF01020e7a01E21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
X [auth F2]PF00935e7a01F21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
AA [auth I2]PF01780e7a01I21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
BA [auth J2]PF01778e7a01J21 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
CA [auth K2]PF00466e7a01K21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
CA [auth K2]PF17777e7a01K22 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
EA [auth M2]PF00298e7a01M22 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
EA [auth M2]PF03946e7a01M21 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
GA [auth S2]PF17135e7a01S21 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
HA [auth T2]PF01159e7a01T21 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
IA [auth U2]PF00327,PF08079e7a01U21 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
JA [auth V2]PF01248e7a01V21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
KA [auth W2]PF00347e7a01W22 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
MA [auth Y2]PF00281,PF00673e7a01Y21 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
OA [auth 12]PF00827e7a01121 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
PA [auth 22]PF00467,PF01777e7a01221 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
QA [auth 32]PF01280e7a01322 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
QA [auth 32]PF01280e7a01321 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
RA [auth 42]PF00687e7a01421 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
RA [auth 42]PF00687e7a01422 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
TA [auth 62]F_UNCLASSIFIEDe7a01621 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
TA [auth 62]PF01775e7a01622 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
UA [auth 72]PF01157e7a01721 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
XA [auth s3]PF04758e7a01s31 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
YA [auth 13]PF01248e7a01131 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
AB [auth G3]PF00366,PF16205e7a01G31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
CB [auth a3]PF00400e7a01a31 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
DB [auth a5]PF00411e7a01a51 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
EB [auth A3]PF00203e7a01A31 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
FB [auth T3]PF00164e7a01T31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
GB [auth U3]PF00318e7a01U31 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
JB [auth X3]PF05162e7a01X31 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
KB [auth Y3]PF00189e7a01Y32 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
KB [auth Y3]PF07650e7a01Y31 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
LB [auth j3]PF00900e7a01j31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
LB [auth j3]PF00467,PF16121e7a01j33 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
LB [auth j3]PF00900,PF08071e7a01j32 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF08071ECOD (1.6)
NB [auth N3]PF00177e7a01N31 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
OB [auth b3]PF01092e7a01b31 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
PB [auth B3]PF00380e7a01B31 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
QB [auth f3]PF01200e7a01f31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
RB [auth F3]PF08069e7a01F31 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
RB [auth F3]PF00312e7a01F32 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
SB [auth c3]PF01201e7a01c31 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
TB [auth C3]PF00833e7a01C31 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
VB [auth D3]PF01249e7a01D31 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
WB [auth e3]PF01248e7a01e31 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
XB [auth E3]PF03501e7a01E31 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
ZB [auth H5]PF01090e7a01H51 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
AC [auth P3]PF01251e7a01P31 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
BC [auth I3]PF00338e7a01I31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
CC [auth I5]PF01282e7a01I51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
EC [auth M3]PF03297e7a01M31 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
FC [auth O3]PF01283e7a01O31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
M [auth u2]PF01198e7a01u21 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
P [auth x2]PF01247e7a01x21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
Q [auth y2]PF01199e7a01y21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
T [auth B2]PF01158e7a01B21 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
U [auth C2]PF01907e7a01C21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
Y [auth G2]PF14204,PF17144e7a01G21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
Z [auth H2]PF00237e7a01H21 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
NA [auth 02]PF00467,PF01929e7a01021 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
SA [auth 52]PF00297e7a01521 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
VA [auth 82]PF01776e7a01821 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
ZA [auth Q3]PF01599e7a01Q31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
BB [auth G5]PF00416e7a01G51 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
HB [auth V3]PF01015e7a01V31 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
HB [auth V3]PF01015e7a01V32 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
IB [auth W3]PF03719e7a01W31 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
IB [auth W3]PF00333e7a01W33 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
IB [auth W3]PF00333e7a01W32 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
MB [auth J5]PF00410e7a01J52 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
MB [auth J5]PF00410e7a01J51 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
UB [auth d3]PF00163,PF01479e7a01d31 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
YB [auth H3]PF00253e7a01H31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
DC [auth L3]PF01667e7a01L31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
GC [auth a7]PF01294e7a01a71 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth p2]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
F [auth k2]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
G [auth l2]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
H [auth m2]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
H [auth m2]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
I [auth o2]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
I [auth o2]PF00467KOW motif (KOW)KOW motif- Family
J [auth q2]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
K [auth r2]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
L [auth t2]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
L [auth t2]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
N [auth v2]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
O [auth w2]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth 92]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
R [auth 92]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
S [auth A2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
V [auth D2]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
W [auth E2]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
X [auth F2]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AA [auth I2]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
BA [auth J2]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
CA [auth K2]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
CA [auth K2]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
DA [auth L2]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
EA [auth M2]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
EA [auth M2]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
GA [auth S2]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
HA [auth T2]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
HA [auth T2]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
IA [auth U2]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
IA [auth U2]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
JA [auth V2]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KA [auth W2]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
MA [auth Y2]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
MA [auth Y2]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
OA [auth 12]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
PA [auth 22]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
PA [auth 22]PF00467KOW motif (KOW)KOW motif- Family
QA [auth 32]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
RA [auth 42]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
TA [auth 62]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
UA [auth 72]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
XA [auth s3]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
YA [auth 13]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
AB [auth G3]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
AB [auth G3]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
CB [auth a3]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
DB [auth a5]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
EB [auth A3]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
FB [auth T3]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
GB [auth U3]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
GB [auth U3]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
JB [auth X3]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
KB [auth Y3]PF07650KH domain (KH_2)KH domain- Domain
KB [auth Y3]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
LB [auth j3]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
LB [auth j3]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
LB [auth j3]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
LB [auth j3]PF00467KOW motif (KOW)KOW motif- Family
NB [auth N3]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
OB [auth b3]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
PB [auth B3]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
QB [auth f3]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
RB [auth F3]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
RB [auth F3]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
SB [auth c3]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
TB [auth C3]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
VB [auth D3]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
WB [auth e3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
XB [auth E3]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
ZB [auth H5]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
AC [auth P3]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
BC [auth I3]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
CC [auth I5]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
EC [auth M3]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
FC [auth O3]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
M [auth u2]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
P [auth x2]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
Q [auth y2]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
T [auth B2]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
U [auth C2]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
Y [auth G2]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
Y [auth G2]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
Z [auth H2]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
FA [auth R2]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
LA [auth X2]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
NA [auth 02]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
SA [auth 52]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
VA [auth 82]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
ZA [auth Q3]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
BB [auth G5]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
HB [auth V3]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
MB [auth J5]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
UB [auth d3]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
UB [auth d3]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
YB [auth H3]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
DC [auth L3]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth E1]INTERNAL RIBOSOME ENTRY SITE---
B [auth e2]28S RIBOSOMAL RNA---
C [auth h2]5.8S RIBOSOMAL RNA---
D [auth d2]5S RIBOSOMAL RNA---
E [auth p2]Uncharacterized protein- - -
F [auth k2]eL14- - -
G [auth l2]Ribosomal protein L24- - -
H [auth m2]Uncharacterized protein- - -
I [auth o2]Ribosomal protein L26- - -
J [auth q2]uL15- - -
K [auth r2]60S ribosomal protein L29---
L [auth t2]uL4- - -
N [auth v2]eL32- - -
O [auth w2]60S RIBOSOMAL PROTEIN UL13
R [auth 92]Uncharacterized protein- - -
S [auth A2]uL29- - -
V [auth D2]ribosomal protein eL39- - -
W [auth E2]60S RIBOSOMAL PROTEIN EL40
X [auth F2]eL42- - -
AA [auth I2]ribosomal protein eL43- - -
BA [auth J2]Uncharacterized protein- - -
CA [auth K2]60S acidic ribosomal protein P0- - -
DA [auth L2]Ribosomal protein L10 (Predicted)- - -
EA [auth M2]Uncharacterized protein- - -
GA [auth S2]60S RIBOSOMAL PROTEIN EL18
HA [auth T2]60S ribosomal protein L6- - -
IA [auth U2]uL30- - -
JA [auth V2]60S RIBOSOMAL PROTEIN EL8
KA [auth W2]Uncharacterized protein- - -
MA [auth Y2]Ribosomal protein L11- - -
OA [auth 12]Ribosomal protein L15- - -
PA [auth 22]60S ribosomal protein L27- - -
QA [auth 32]60S RIBOSOMAL PROTEIN EL19
RA [auth 42]Ribosomal protein- - -
TA [auth 62]60S RIBOSOMAL PROTEIN EL20
UA [auth 72]eL21- - -
WA [auth K3]18S RIBOSOMAL RNA---
XA [auth s3]40S RIBOSOMAL PROTEIN ES30
YA [auth 13]Ribosomal protein L30- - -
AB [auth G3]Ribosomal protein S11- - -
CB [auth a3]ribosomal protein RACK1- - -
DB [auth a5]Uncharacterized protein- - -
EB [auth A3]ribosomal protein uS19- - -
FB [auth T3]Ribosomal protein S23- - -
GB [auth U3]40S_SA_C domain-containing protein
JB [auth X3]60s ribosomal protein l41- - -
KB [auth Y3]Ribosomal protein S3- - -
LB [auth j3]40S ribosomal protein S4,40S ribosomal protein S4- - -
NB [auth N3]Ribosomal protein S5
OB [auth b3]40S ribosomal protein S6- - -
PB [auth B3]Uncharacterized protein- - -
QB [auth f3]ribosomal protein eS28- - -
RB [auth F3]ribosomal protein uS15- - -
SB [auth c3]40S ribosomal protein S8- - -
TB [auth C3]Uncharacterized protein- - -
VB [auth D3]40S RIBOSOMAL PROTEIN ES21
WB [auth e3]40S ribosomal protein S12- - -
XB [auth E3]S10_plectin domain-containing protein- - -
ZB [auth H5]Uncharacterized protein- - -
AC [auth P3]40S RIBOSOMAL PROTEIN ES7
BC [auth I3]Ribosomal_S10 domain-containing protein
CC [auth I5]40S ribosomal protein S24
EC [auth M3]ribosomal protein eS25- - -
FC [auth O3]40S RIBOSOMAL PROTEIN ES26
M [auth u2]eL31- - -
P [auth x2]eL33- - -
Q [auth y2]eL34---
T [auth B2]60S ribosomal protein L36- - -
U [auth C2]Ribosomal protein L37- - -
Y [auth G2]60S ribosomal protein L5---
Z [auth H2]uL22---
FA [auth R2]Ribosomal_L6e_N domain-containing protein
LA [auth X2]Ribosomal protein L10 (Predicted)- - -
NA [auth 02]Ribosomal protein L14---
SA [auth 52]uL3- - -
VA [auth 82]Ribosomal protein L22- - -
ZA [auth Q3]40S ribosomal protein S27a- - -
BB [auth G5]ribosomal protein uS13- - -
HB [auth V3]40S ribosomal protein S3a- - -
IB [auth W3]S5 DRBM domain-containing protein---
MB [auth J5]Ribosomal protein S15a- - -
UB [auth d3]Ribosomal protein S9 (Predicted)- - -
YB [auth H3]ribosomal protein uS14- - -
DC [auth L3]40S ribosomal protein S27- - -
GC [auth a7]60S ribosomal protein L13- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth w2]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
O [auth w2]IPR005822Large ribosomal subunit protein uL13Family
O [auth w2]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
O [auth w2]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
W [auth E2]IPR019954Ubiquitin conserved siteConserved Site
W [auth E2]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
W [auth E2]IPR000626Ubiquitin-like domainDomain
W [auth E2]IPR019956Ubiquitin domainDomain
W [auth E2]IPR001975Large ribosomal subunit protein eL40 domainDomain
W [auth E2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
GA [auth S2]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
GA [auth S2]IPR000039Large ribosomal subunit protein eL18Family
GA [auth S2]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GA [auth S2]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JA [auth V2]IPR001921Large ribosomal subunit protein eL8Family
JA [auth V2]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JA [auth V2]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
JA [auth V2]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
JA [auth V2]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
QA [auth 32]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
QA [auth 32]IPR039547Large ribosomal subunit protein eL19Family
QA [auth 32]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
QA [auth 32]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
QA [auth 32]IPR000196Large ribosomal subunit protein eL19 domainDomain
QA [auth 32]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
TA [auth 62]IPR028877Large ribosomal subunit protein eL20Family
TA [auth 62]IPR023573Large ribosomal subunit protein eL20 domainDomain
TA [auth 62]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
XA [auth s3]IPR006846Small ribosomal subunit protein eS30Family
GB [auth U3]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
GB [auth U3]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
GB [auth U3]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
GB [auth U3]IPR001865Small ribosomal subunit protein uS2Family
GB [auth U3]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
GB [auth U3]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
NB [auth N3]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
NB [auth N3]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
NB [auth N3]IPR000235Small ribosomal subunit protein uS7Family
NB [auth N3]IPR023798Small ribosomal subunit protein uS7 domainDomain
NB [auth N3]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
VB [auth D3]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
VB [auth D3]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
VB [auth D3]IPR001931Small ribosomal subunit protein eS21Family
AC [auth P3]IPR000554Small ribosomal subunit protein eS7Family
AC [auth P3]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
BC [auth I3]IPR001848Small ribosomal subunit protein uS10Family
BC [auth I3]IPR027486Small ribosomal subunit protein uS10 domainDomain
BC [auth I3]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
BC [auth I3]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
BC [auth I3]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
CC [auth I5]IPR001976Small ribosomal subunit protein eS24Family
CC [auth I5]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CC [auth I5]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
FC [auth O3]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
FC [auth O3]IPR000892Small ribosomal subunit protein eS26Family
FC [auth O3]IPR047864Ribosomal protein eS26, conserved siteConserved Site
FA [auth R2]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
FA [auth R2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth R2]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
FA [auth R2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth R2]IPR000915Large ribosomal subunit protein eL6Family