6ZTZ
Assembly intermediates of orthoreovirus captured in the cell
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth K] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
D [auth K] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
E [auth L] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
E [auth L] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
F [auth M] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
F [auth M] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
K [auth Z] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
I [auth X] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
J [auth Y] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF22033 | e6ztzB1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
B [auth C] | PF22033 | e6ztzC1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
H [auth P] | PF03084 | e6ztzP1 | A: alpha complex topology | X: Core protein VP6 (From Topology) | H: Core protein VP6 (From Topology) | T: Core protein VP6 | F: PF03084 | ECOD (1.6) |
C [auth D] | PF03084 | e6ztzD1 | A: alpha complex topology | X: Core protein VP6 (From Topology) | H: Core protein VP6 (From Topology) | T: Core protein VP6 | F: PF03084 | ECOD (1.6) |
D [auth K] | PF05993 | e6ztzK3 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in membrane penetration protein mu1 (From Topology) | T: Jelly-roll domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
D [auth K] | PF05993 | e6ztzK2 | A: alpha arrays | X: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | H: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | T: Alpha-helical domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
D [auth K] | PF05993 | e6ztzK1 | A: a+b complex topology | X: a+b domain in membrane penetration protein mu1 (From Topology) | H: a+b domain in membrane penetration protein mu1 (From Topology) | T: a+b domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
E [auth L] | PF05993 | e6ztzL1 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in membrane penetration protein mu1 (From Topology) | T: Jelly-roll domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
E [auth L] | PF05993 | e6ztzL2 | A: alpha arrays | X: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | H: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | T: Alpha-helical domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
E [auth L] | PF05993 | e6ztzL3 | A: a+b complex topology | X: a+b domain in membrane penetration protein mu1 (From Topology) | H: a+b domain in membrane penetration protein mu1 (From Topology) | T: a+b domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
F [auth M] | PF05993 | e6ztzM1 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in membrane penetration protein mu1 (From Topology) | T: Jelly-roll domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
F [auth M] | PF05993 | e6ztzM3 | A: alpha arrays | X: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | H: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | T: Alpha-helical domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
F [auth M] | PF05993 | e6ztzM2 | A: a+b complex topology | X: a+b domain in membrane penetration protein mu1 (From Topology) | H: a+b domain in membrane penetration protein mu1 (From Topology) | T: a+b domain in membrane penetration protein mu1 | F: PF05993 | ECOD (1.6) |
G [auth O] | PF06016 | e6ztzO7 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF06016 | ECOD (1.6) |
G [auth O] | PF21060 | e6ztzO8 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21060 | ECOD (1.6) |
G [auth O] | PF21061 | e6ztzO5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21061 | ECOD (1.6) |
G [auth O] | PF21062 | e6ztzO2 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
G [auth O] | PF21063 | e6ztzO4 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
G [auth O] | PF21064 | e6ztzO1 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
G [auth O] | PF21065 | e6ztzO6 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
G [auth O] | PF21066 | e6ztzO3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
K [auth Z] | PF00979 | e6ztzZ1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: PF00979 | ECOD (1.6) |
I [auth X] | PF00979 | e6ztzX1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: PF00979 | ECOD (1.6) |
J [auth Y] | PF00979 | e6ztzY1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: PF00979 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth D], H [auth P] | PF03084 | Reoviral Sigma1/Sigma2 family (Sigma_1_2) | Reoviral Sigma1/Sigma2 family | - | Family |
D [auth K], E [auth L], F [auth M] | PF05993 | Reovirus major virion structural protein Mu-1/Mu-1C (M2) (Reovirus_M2) | Reovirus major virion structural protein Mu-1/Mu-1C (M2) | - | Family |
G [auth O] | PF21064 | Reovirus core-spike protein lambda-2 (L2), N-terminal (Reovirus_L2_N) | Reovirus core-spike protein lambda-2 (L2), N-terminal | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21063 | Reovirus core-spike protein lambda-2 (L2), GTase domain (Reovirus_L2_GTase) | Reovirus core-spike protein lambda-2 (L2), GTase domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21066 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 (Reovirus_L2_MT2) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21065 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 (Reovirus_L2_MT1) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21060 | Reovirus core-spike protein lambda-2 (L2), 6th domain (Reovirus_L2_6th) | Reovirus core-spike protein lambda-2 (L2), 6th domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21062 | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain (Reovirus_L2_4th) | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF06016 | Reovirus core-spike protein lambda-2 (L2), C-terminal (Reovirus_L2_8th) | Reovirus core-spike protein lambda-2 (L2), C-terminal | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
G [auth O] | PF21061 | Reovirus core-spike protein lambda-2 (L2), 7th domain (Reovirus_L2_7th) | Reovirus core-spike protein lambda-2 (L2), 7th domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth X], J [auth Y], K [auth Z] | PF00979 | Reovirus outer capsid protein, Sigma 3 (Reovirus_cap) | Reovirus outer capsid protein, Sigma 3 | - | Family |