6Y17
Crystal structure of an NCoR1BBD2-BCL6BTB chimera in complex with nebulinSH3-NCoR1BBD1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6y17a_ | Alpha and beta proteins (a+b) | POZ domain | POZ domain | BTB/POZ domain | B-cell lymphoma 6 (Bcl6) protein BTB domain | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6y17b1 | Alpha and beta proteins (a+b) | POZ domain | POZ domain | BTB/POZ domain | B-cell lymphoma 6 (Bcl6) protein BTB domain | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6y17b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | POZ domain | 8040250 | 3000894 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | POZ domain | 8040250 | 3000894 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SH3-domain | 8041571 | 3000153 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SH3-domain | 8041571 | 3000153 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00651 | e6y17A1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF00651 | ECOD (1.6) |
B | PF00651 | e6y17B1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: PF00651 | ECOD (1.6) |
C | PF14604 | e6y17C1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF14604 | ECOD (1.6) |
D | PF14604 | e6y17D1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF14604 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00651 | BTB/POZ domain (BTB) | BTB/POZ domain | The BTB (for BR-C, ttk and bab) [1] or POZ (for Pox virus and Zinc finger) [2] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family o ... | Domain | |
PF14604 | Variant SH3 domain (SH3_9) | Variant SH3 domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013087 | Zinc finger C2H2-type | Domain | |
IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily | |
IPR036236 | Zinc finger C2H2 superfamily | Homologous Superfamily | |
IPR000210 | BTB/POZ domain | Domain | |
IPR017930 | Myb domain | Domain | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR031557 | N-CoR, GPS2-interacting domain | Domain | |
IPR017884 | SANT domain | Domain | |
IPR001005 | SANT/Myb domain | Domain | |
IPR035629 | Nebulin, SH3 domain | Domain | |
IPR001452 | SH3 domain | Domain | |
IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
IPR000900 | Nebulin repeat | Repeat | |
IPR013998 | Nebulin-like | Family | |
IPR017930 | Myb domain | Domain | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR031557 | N-CoR, GPS2-interacting domain | Domain | |
IPR017884 | SANT domain | Domain | |
IPR001005 | SANT/Myb domain | Domain |