6X66
Legionella pneumophila dDot T4SS OMC
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
BA [auth DK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
D [auth AK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FC [auth KK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
HB [auth HK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
JA [auth EK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
L [auth BK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
NC [auth LK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
PB [auth IK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
RA [auth FK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
T [auth CK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
VC [auth MK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
XB [auth JK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
ZA [auth GK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
AD [auth AA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
BD [auth BA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
CD [auth CA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
DD [auth DA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
ED [auth EA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
FD [auth FA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GD [auth GA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
HD [auth HA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
ID [auth IA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
JD [auth JA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
KD [auth KA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
LD [auth LA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
MD [auth QA] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
BA [auth DK] | PF00691 | e6x66DK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
D [auth AK] | PF00691 | e6x66AK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
FC [auth KK] | PF00691 | e6x66KK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
HB [auth HK] | PF00691 | e6x66HK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
JA [auth EK] | PF00691 | e6x66EK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
L [auth BK] | PF00691 | e6x66BK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
NC [auth LK] | PF00691 | e6x66LK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
PB [auth IK] | PF00691 | e6x66IK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
RA [auth FK] | PF00691 | e6x66FK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
T [auth CK] | PF00691 | e6x66CK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
VC [auth MK] | PF00691 | e6x66MK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
XB [auth JK] | PF00691 | e6x66JK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
ZA [auth GK] | PF00691 | e6x66GK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
AD [auth AA] | PF00691 | e6x66AA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
BD [auth BA] | PF00691 | e6x66BA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
CD [auth CA] | PF00691 | e6x66CA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
DD [auth DA] | PF00691 | e6x66DA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
ED [auth EA] | PF00691 | e6x66EA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
FD [auth FA] | PF00691 | e6x66FA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
GD [auth GA] | PF00691 | e6x66GA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
HD [auth HA] | PF00691 | e6x66HA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
ID [auth IA] | PF00691 | e6x66IA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
JD [auth JA] | PF00691 | e6x66JA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
KD [auth KA] | PF00691 | e6x66KA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
LD [auth LA] | PF00691 | e6x66LA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
MD [auth QA] | PF00691 | e6x66QA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: PF00691 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16932 | Type IV secretory system, conjugal DNA-protein transfer (T4SS_TraI) | Type IV secretory system, conjugal DNA-protein transfer | - | Family | |
PF16816 | DotD protein (DotD) | DotD protein | The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH [1]. | Domain | |
PF12293 | Putative outer membrane core complex of type IVb secretion (T4BSS_DotH_IcmK) | Putative outer membrane core complex of type IVb secretion | - | Family | |
PF00691 | OmpA family (OmpA) | OmpA family | - | Family | |
PF00691 | OmpA family (OmpA) | OmpA family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DotC | - | - | - | |
DotD | - | - | - | |
Type IV secretion protein IcmK | - | - | - | |
Inner membrane lipoprotein YiaD | - | - | ||
Type IV secretion system unknown protein fragment | - | - | - | |
Outer membrane protein, OmpA family protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031618 | Putative type IV secretory system protein | Family | |
IPR038140 | DotD superfamily | Homologous Superfamily | |
IPR031817 | DotD protein | Family | |
IPR006665 | OmpA-like domain | Domain | |
IPR036737 | OmpA-like domain superfamily | Homologous Superfamily | |
IPR006665 | OmpA-like domain | Domain | |
IPR036737 | OmpA-like domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Type IV Secretion Systems | Dot T4SS OMC type IV secretion system |