6USM
Structure of nuclease domain of human parvovirus B19 non-structural protein 1 in complex with zinc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01547 | e6usmA2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
B | PF08724 | e6usmB1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: PF08724 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family | |
PF08724 | Rep protein catalytic domain like (Rep_N) | Rep protein catalytic domain like | Adeno-associated virus (AAV) Replication (Rep) protein is essential for viral replication and integration. The catalytic domain has DNA binding and endonuclease activity. | Domain |