6T7F
RCR E3 ligase E2-Ubiquitin transthiolation intermediate
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6t7fb1 | Alpha and beta proteins (a+b) | UBC-like | UBC-like | UBC-related | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6t7fb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d6t7fc_ | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Ubiquitin-like | Ubiquitin-related | Ubiquitin | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13639 | e6t7fA2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: PF13639 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6t7fA1 | A: few secondary structure elements | X: RING/U-box-like | H: tandem cysteine domain (From Topology) | T: tandem cysteine domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00179 | e6t7fB1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: PF00179 | ECOD (1.6) |
C | PF00240 | e6t7fC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00179 | Ubiquitin-conjugating enzyme (UQ_con) | Ubiquitin-conjugating enzyme | Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ... | Domain | |
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000408 | Regulator of chromosome condensation, RCC1 | Repeat | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR012983 | PHR | Domain | |
IPR038648 | PHR domain superfamily | Homologous Superfamily | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Homologous Superfamily | |
IPR017868 | Filamin/ABP280 repeat-like | Repeat | |
IPR004939 | APC10/DOC domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR016135 | Ubiquitin-conjugating enzyme/RWD-like | Homologous Superfamily | |
IPR000608 | Ubiquitin-conjugating enzyme E2 | Domain | |
IPR023313 | Ubiquitin-conjugating enzyme, active site | Active Site | |
IPR019954 | Ubiquitin conserved site | Conserved Site | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR019956 | Ubiquitin domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |