Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF08428e6s5yA2 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
BPF08428e6s5yB1 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
CPF08428e6s5yC1 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
DPF08428e6s5yD2 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
EPF08428e6s5yE1 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
FPF08428e6s5yF2 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
GPF08428e6s5yG1 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)
HPF08428e6s5yH2 A: beta sandwichesX: A putative surface protein (From Topology)H: A putative surface protein (From Topology)T: A putative surface proteinF: PF08428ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF17480AlphaC N-terminal domain 2 (AlphaC_N2)AlphaC N-terminal domain 2This is the second domain on the N-terminal region found on the alpha C protein (ACP). ACP is found in Streptococcus and acts as an invasin which plays a role in the internalisation and translocation of the organism across human epithelial surfaces [ ...This is the second domain on the N-terminal region found on the alpha C protein (ACP). ACP is found in Streptococcus and acts as an invasin which plays a role in the internalisation and translocation of the organism across human epithelial surfaces [1]. Group B Streptococcus is the leading cause of diseases including bacterial pneumonia, sepsis and meningitis. ACP consists of an N-terminal domain (NtACP; 170 amino acids) followed by a variable number of tandem repeats (82 amino acids each) and a C-terminal domain (45 amino acids) containing an LPXTG peptidoglycan-anchoring motif. The NtACP, contains two structural domains, D1 and D2. D1, the more distal (amino-terminal) portion Pfam:PF08829 and consists of a beta sandwich with strong structural homology to fibronectin's integrin-binding region (FnIII10). This entry, D2 (connects distally to Domain 1 and proximally to the repeat region) [1] consists of three antiparallel alpha helix coils [2]. It is suggested that the GAG-binding region of ACP may extend from Domain 2 into the repeat region [3].
Domain
A, B, C, D, E
PF08428Rib domain (Rib)Rib domainThe region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib (Swiss:P72362) and alpha (Swiss:Q02192). These are expressed by group B streptococci, and Rib is thought to confer protective immunity.Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR038544ACP, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR019950M protein-type anchor domainDomain
A, B, C, D, E
IPR005877YSIRK Gram-positive signal peptideDomain
A, B, C, D, E
IPR038335ACP, C-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR012706Rib/alpha/Esp surface antigen repeatRepeat
A, B, C, D, E
IPR035327AlphaC, C-terminalDomain
A, B, C, D, E
IPR014933Alpha C protein, N-terminalDomain
A, B, C, D, E
IPR019931LPXTG cell wall anchor domainDomain