6Q2L
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | V-region of surface antigen I/II (SA I/II PAC) | 8076867 | 3000865 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08363 | e6q2lA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology) | T: V-region of surface antigen I/II (SA I/II, PAC) | F: PF08363 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06696 | Streptococcal surface antigen repeat (Strep_SA_rep) | Streptococcal surface antigen repeat | - | Repeat | |
PF08363 | Glucan-binding protein C (GbpC) | Glucan-binding protein C | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Agglutinin receptor | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009578 | Cell surface antigen I/II A repeat | Repeat | |
IPR013574 | Glucan-binding protein C/Surface antigen I/II, V-domain | Domain | |
IPR041324 | Antigen I/II, N-terminal | Domain | |
IPR032300 | Cell surface antigen, C-terminal | Domain | |
IPR036234 | Glucan-binding protein C/Surface antigen I/II, V-domain superfamily | Homologous Superfamily | |
IPR026345 | Adhesin isopeptide-forming adherence domain | Domain | |
IPR021197 | Cross-wall-targeting lipoprotein motif | Conserved Site | |
IPR019931 | LPXTG cell wall anchor domain | Domain |