6P4G

Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
HA [auth h]	d6p4gh_	All beta proteins	7-bladed beta-propeller	WD40 repeat-like	WD40-repeat	Guanine nucleotide-binding protein subunit beta-2-like 1 (GNB2L1 or RACK1)	(Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097826	3001397	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ribosomal S3Ae-like	8053216	3002166	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Winged helix DNA-binding domain	8055720	3000034	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Translational machinery components	8097824	3000571	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053150	3000068	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
EA [auth e]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
FA [auth f]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
HA [auth h]	SCOP2B Superfamily	WD40 repeat-like	8097816	3001694	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PF00318	e6p4gB1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: PF00318	ECOD (1.6)
C	PF01015	e6p4gC1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: PF01015	ECOD (1.6)
C	PF01015	e6p4gC2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: PF01015	ECOD (1.6)
D	PF03719	e6p4gD1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF03719	ECOD (1.6)
D	PF00333	e6p4gD2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: PF00333	ECOD (1.6)
D	PF00333	e6p4gD3	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: PF00333	ECOD (1.6)
E	PF00189	e6p4gE1	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: PF00189	ECOD (1.6)
E	PF07650	e6p4gE2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: PF07650	ECOD (1.6)
F	PF00900	e6p4gF2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00900	ECOD (1.6)
F	PF00467,PF16121	e6p4gF3	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PF00467,PF16121	ECOD (1.6)
F	PF00900,PF08071	e6p4gF1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00900,PF08071	ECOD (1.6)
G	PF00177	e6p4gG1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: PF00177	ECOD (1.6)
H	PF01092	e6p4gH1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: PF01092	ECOD (1.6)
I	PF01251	e6p4gI1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: PF01251	ECOD (1.6)
J	PF01201	e6p4gJ1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: PF01201	ECOD (1.6)
K	PF00163,PF01479	e6p4gK1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: PF00163,PF01479	ECOD (1.6)
L	PF03501	e6p4gL1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03501	ECOD (1.6)
M	PF00366,PF16205	e6p4gM1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00366,PF16205	ECOD (1.6)
N	PF01248	e6p4gN1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: PF01248	ECOD (1.6)
O	PF08069	e6p4gO1	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: PF08069	ECOD (1.6)
O	PF00312	e6p4gO2	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: PF00312	ECOD (1.6)
P	PF00411	e6p4gP1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: PF00411	ECOD (1.6)
Q	PF00203	e6p4gQ1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: PF00203	ECOD (1.6)
R	PF00380	e6p4gR1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: PF00380	ECOD (1.6)
S	PF00833	e6p4gS1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: PF00833	ECOD (1.6)
T	PF00416	e6p4gT1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: PF00416	ECOD (1.6)
U	PF01090	e6p4gU1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF01090	ECOD (1.6)
V	PF00338	e6p4gV1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: PF00338	ECOD (1.6)
W	PF01249	e6p4gW1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: PF01249	ECOD (1.6)
X	PF00410	e6p4gX2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: PF00410	ECOD (1.6)
X	PF00410	e6p4gX1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: PF00410	ECOD (1.6)
Y	PF00164	e6p4gY1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF00164	ECOD (1.6)
Z	PF01282	e6p4gZ1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: PF01282	ECOD (1.6)
AA [auth a]	PF03297	e6p4ga1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF03297	ECOD (1.6)
BA [auth b]	PF01283	e6p4gb1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF01283	ECOD (1.6)
CA [auth c]	PF01667	e6p4gc1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01667	ECOD (1.6)
DA [auth d]	PF01200	e6p4gd1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: PF01200	ECOD (1.6)
EA [auth e]	PF00253	e6p4ge1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: PF00253	ECOD (1.6)
FA [auth f]	PF04758	e6p4gf1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: PF04758	ECOD (1.6)
GA [auth g]	PF01599	e6p4gg1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: PF01599	ECOD (1.6)
HA [auth h]	PF00400	e6p4gh1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF00400	ECOD (1.6)
IA [auth n]	PF05162	e6p4gn1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: PF05162	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.10490	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glucose-6-phosphate isomerase like protein	CATH (utative)
D	3.30.160.20	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain		CATH (utative)
D	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (utative)
F	3.10.290.10	Alpha Beta	Roll	Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region	Chain A	CATH (utative)
F	2.40.50.740	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Ribosomal protein S4, central domain	CATH (utative)
F	2.30.30.30	Mainly Beta	Roll	SH3 type barrels.		CATH (utative)
G	1.10.455.10	Mainly Alpha	Orthogonal Bundle	Ribosomal Protein S7	Ribosomal protein S7/S5	CATH (utative)
J	1.10.168.20	Mainly Alpha	Orthogonal Bundle	Phosducin	domain 2	CATH (utative)
L	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
M	2.40.50.1000	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (utative)
N	3.30.1330.30	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
O	1.10.287.10	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	S15/NS1, RNA-binding	CATH (utative)
P	3.30.420.80	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (utative)
R	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (utative)
V	3.30.70.600	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S10	CATH (utative)
W	3.30.1230.20	Alpha Beta	2-Layer Sandwich	Hypothetical Cytosolic Protein	Chain: A	CATH (utative)
X	3.30.1370.30	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
X	3.30.1490.10	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (utative)
Z	3.30.70.3370	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (utative)
AA [auth a]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
BA [auth b]	3.30.1740.20	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Ribosomal protein S26	CATH (utative)
CA [auth c]	2.20.25.100	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	Ribosomal protein S27	CATH (utative)
DA [auth d]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (utative)
EA [auth e]	4.10.830.10	Few Secondary Structures	Irregular	30s Ribosomal Protein S14	Chain N	CATH (utative)
HA [auth h]	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
B	PF16122	40S ribosomal protein SA C-terminus (40S_SA_C)	40S ribosomal protein SA C-terminus	-	Family
C	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
D	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain	-	Domain
D	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain	-	Domain
E	PF07650	KH domain (KH_2)	KH domain	-	Domain
E	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
F	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
F	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
F	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
F	PF00467	KOW motif (KOW)	KOW motif	-	Family
G	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
H	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
I	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family
J	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
K	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
K	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
L	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
M	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
M	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
N	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
O	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
O	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
P	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
Q	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
R	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
S	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
T	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
U	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
V	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
W	PF01249	Ribosomal protein S21e (Ribosomal_S21e)	Ribosomal protein S21e	-	Family
X	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
Y	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	-	Family
Z	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
AA [auth a]	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
BA [auth b]	PF01283	Ribosomal protein S26e (Ribosomal_S26e)	Ribosomal protein S26e	-	Family
CA [auth c]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
DA [auth d]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
EA [auth e]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
FA [auth f]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
GA [auth g]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
HA [auth h]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
IA [auth n]	PF05162	Ribosomal protein L41 (Ribosomal_L41)	Ribosomal protein L41	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 2]	18S rRNA	-	-	-
B	uS2	-	-	-
C	eS1	-	-	-
D	uS5	-	-	-
E	uS3	-	-	-
F	eS4	-	-	-
G	uS7	-	-	-
H	eS6	-	-	-
I	eS7	-	-	-
J	eS8	-	-	-
K	uS4	-	-	-
L	eS10	-	-	-
M	uS17	-	-	-
N	eS12	-	-	-
O	uS15	-	-	-
P	uS11	-	-	-
Q	uS19	-	-	-
R	uS9	-	-	-
S	eS17	-	-	-
T	uS13	-	-	-
U	eS19	-	-	-
V	uS10	-	-	-
W	eS21	-	-	-
X	uS8	-	-	-
Y	uS12	-	-	-
Z	eS24	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	ribosomal subunit intracellular organelle protein-containing complex intracellular anatomical structure organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
AA [auth a]	eS25	-	-	-
BA [auth b]	eS26	-	-	-
CA [auth c]	eS27	-	-	-
DA [auth d]	eS28	-	-	-
EA [auth e]	eS29	-	-	-
FA [auth f]	eS30	-	-	-
GA [auth g]	eS31	-	-	-
HA [auth h]	RACK1	-	-	-
IA [auth n]	eL41	-	-	-
JA [auth 1]	IAPV-IRES	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
L	IPR037447	Small ribosomal subunit protein eS10	Family
L	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
L	IPR005326	Plectin/eS10, N-terminal	Domain
Z	IPR001976	Small ribosomal subunit protein eS24	Family
Z	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Z	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site