6P0X

Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNTD-SpvB-like8102229 4007457 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyEffector protein SpvB N-terminal domain-like8102234 3002724 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyEffector protein SpvB N-terminal domain-like8102234 3002724 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03534e6p0xA1 A: beta meandersX: Rearrangement hotspot (RHS) repeats protein (From Topology)H: Rearrangement hotspot (RHS) repeats protein (From Topology)T: Rearrangement hotspot (RHS) repeats proteinF: PF03534ECOD (1.6)
BPF03534e6p0xB1 A: beta meandersX: Rearrangement hotspot (RHS) repeats protein (From Topology)H: Rearrangement hotspot (RHS) repeats protein (From Topology)T: Rearrangement hotspot (RHS) repeats proteinF: PF03534ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF03534Salmonella virulence plasmid 65kDa B protein (SpvB)Salmonella virulence plasmid 65kDa B protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Salmonella plasmid virulence: SpvB -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR003540ADP ribosyltransferaseDomain
A, B
IPR003284Salmonella virulence plasmid 65kDa B proteinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
MLY Parent Component: LYS

RESID:  AA0075

PSI-MOD :  N6,N6-dimethyl-L-lysine MOD:00084