6OK1
Ltp2-ChsH2(DUF35) aldolase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Thiolase_C_1 | e6ok1A2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Thiolase_C_1 | ECOD (1.6) |
A | ACP_syn_III | e6ok1A1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ACP_syn_III | ECOD (1.6) |
C | Thiolase_C_1 | e6ok1C2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Thiolase_C_1 | ECOD (1.6) |
C | ACP_syn_III | e6ok1C1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ACP_syn_III | ECOD (1.6) |
B | UNK_F_TYPE | e6ok1B2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e6ok1B1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: UNK_F_TYPE | ECOD (1.6) |
D | UNK_F_TYPE | e6ok1D2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: UNK_F_TYPE | ECOD (1.6) |
D | UNK_F_TYPE | e6ok1D1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain | |
PF12172 | Rubredoxin-like zinc ribbon domain (DUF35_N) (DUF35_N) | Rubredoxin-like zinc ribbon domain (DUF35_N) | This domain has no known function and is found in conserved hypothetical archaeal and bacterial proteins. The domain is duplicated in Swiss:O53566. The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin ... | Domain | |
PF01796 | DUF35 OB-fold domain, acyl-CoA-associated (OB_aCoA_assoc) | DUF35 OB-fold domain, acyl-CoA-associated | The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin-like zinc ribbon domain and a C-terminal OB fold domain represented in this entry. OB-folds are frequently found to bind nucleic acids suggesting thi ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016039 | Thiolase-like | Homologous Superfamily | |
IPR020616 | Thiolase, N-terminal | Domain | |
IPR002155 | Thiolase | Family | |
IPR039569 | N-terminal of MaoC-like dehydratase | Domain | |
IPR002878 | Domain of unknown function DUF35, OB-fold, C-terminal | Domain | |
IPR022002 | Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR029069 | HotDog domain superfamily | Homologous Superfamily |