Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe6od1A2 A: a+b four layersX: Ntn/PP2CH: Protein serine/threonine phosphatase 2C, catalytic domain (From Topology)T: Protein serine/threonine phosphatase 2C, catalytic domainF: F_UNCLASSIFIEDECOD (1.6)
APF00072e6od1A1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF00072ECOD (1.6)
BPF04965e6od1B1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF04965ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00072Response regulator receiver domain (Response_reg)Response regulator receiver domainThis domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.Domain
PF04965Baseplate wedge protein gp25 (GPW_gp25)Baseplate wedge protein gp25This family represents T4 phage gp25 protein and gp25-like proteins, found in several systems, including contractile tail bacteriophages, the type VI secretion system (T6SS) and R-type pyocins, which constitute a multiprotein tubular apparatus to att ...This family represents T4 phage gp25 protein and gp25-like proteins, found in several systems, including contractile tail bacteriophages, the type VI secretion system (T6SS) and R-type pyocins, which constitute a multiprotein tubular apparatus to attach to and penetrate host cell membranes. Gp25 is a component of the conserved wedge in the inner part of the baseplate and serves as a nucleus for sheath polymerisation, playing a critical role in sheath assembly and contraction [1,2]. The EPR motif (Glu-Pro-Arg, residues 85-87 of gp25) is conserved across all members of the family including orthologues from the RpoS-mediated general stress response system (called IraD) [3,4]. This motif interacts with the 'core bundle' composed of orthologues of T4 gp6 and gp7 proteins in contractile injection systems.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Regulator of RpoS---
Anti-adapter protein IraD

InterPro: Protein Family Classification InterPro Database Homepage