6M10
Crystal structure of PA4853 (Fis) from Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6m10a_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
C [auth B] | d6m10b_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
D | d6m10d_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
B [auth C] | d6m10c_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02954 | e6m10A1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF02954 | ECOD (1.6) |
C [auth B] | PF02954 | e6m10B1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF02954 | ECOD (1.6) |
D | PF02954 | e6m10D1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF02954 | ECOD (1.6) |
B [auth C] | PF02954 | e6m10C1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF02954 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
C [auth B] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
D | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
B [auth C] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth B], D | PF02954 | Bacterial regulatory protein, Fis family (HTH_8) | Bacterial regulatory protein, Fis family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth B], D | IPR002197 | DNA binding HTH domain, Fis-type | Domain |
A, B [auth C], C [auth B], D | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth B], D | IPR005412 | DNA-binding protein Fis | Family |