6KD6
Shuguo PWWP domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6kd6b1 | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | automated matches | automated matches | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
B | d6kd6b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
C | d6kd6c_ | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | automated matches | automated matches | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
D | d6kd6d_ | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | automated matches | automated matches | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
A | d6kd6a_ | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | automated matches | automated matches | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8095359 | 3000404 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8095359 | 3000404 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8095359 | 3000404 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8095359 | 3000404 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00855 | e6kd6B1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00855 | ECOD (1.6) |
C | PF00855 | e6kd6C1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00855 | ECOD (1.6) |
D | PF00855 | e6kd6D1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00855 | ECOD (1.6) |
A | PF00855 | e6kd6A1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00855 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00855 | PWWP domain (PWWP) | PWWP domain | The PWWP domain is named after a conserved Pro-Trp-Trp-Pro motif [1]. The domain binds to Histone-4 methylated at lysine-20, H4K20me, suggesting that it is methyl-lysine recognition motif. Removal of two conserved aromatic residues in a hydrophobic c ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
LD23804p | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021567 | Lens epithelium-derived growth factor, integrase-binding domain | Domain | |
IPR036218 | HIV integrase-binding domain superfamily | Homologous Superfamily | |
IPR000313 | PWWP domain | Domain | |
IPR035441 | TFIIS/LEDGF domain superfamily | Homologous Superfamily |