Annotations: 6KAJ

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF04991	e6kajA2	A: a+b three layers	X: Nucleotidyltransferase-like	H: Nucleotidyltransferase (From Topology)	T: Nucleotidyltransferase	F: PF04991	ECOD (1.6)
A	PF22921	e6kajA1	A: a/b three-layered sandwiches	X: Nucleotide-diphospho-sugar transferases (From Topology)	H: Nucleotide-diphospho-sugar transferases (From Topology)	T: Nucleotide-diphospho-sugar transferases	F: PF22921	ECOD (1.6)
B	PF04991	e6kajB2	A: a+b three layers	X: Nucleotidyltransferase-like	H: Nucleotidyltransferase (From Topology)	T: Nucleotidyltransferase	F: PF04991	ECOD (1.6)
B	PF22921	e6kajB1	A: a/b three-layered sandwiches	X: Nucleotide-diphospho-sugar transferases (From Topology)	H: Nucleotide-diphospho-sugar transferases (From Topology)	T: Nucleotide-diphospho-sugar transferases	F: PF22921	ECOD (1.6)
C	PF04991	e6kajC2	A: a+b three layers	X: Nucleotidyltransferase-like	H: Nucleotidyltransferase (From Topology)	T: Nucleotidyltransferase	F: PF04991	ECOD (1.6)
C	PF22921	e6kajC1	A: a/b three-layered sandwiches	X: Nucleotide-diphospho-sugar transferases (From Topology)	H: Nucleotide-diphospho-sugar transferases (From Topology)	T: Nucleotide-diphospho-sugar transferases	F: PF22921	ECOD (1.6)
D	PF04991	e6kajD2	A: a+b three layers	X: Nucleotidyltransferase-like	H: Nucleotidyltransferase (From Topology)	T: Nucleotidyltransferase	F: PF04991	ECOD (1.6)
D	PF22921	e6kajD1	A: a/b three-layered sandwiches	X: Nucleotide-diphospho-sugar transferases (From Topology)	H: Nucleotide-diphospho-sugar transferases (From Topology)	T: Nucleotide-diphospho-sugar transferases	F: PF22921	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF04991	LicD family (LicD)	LicD family	The LICD family of proteins show high sequence similarity and are involved in phosphorylcholine metabolism. There is evidence to show that LicD2 mutants have a reduced ability to take up choline, have decreased ability to adhere to host cells and are ...	The LICD family of proteins show high sequence similarity and are involved in phosphorylcholine metabolism. There is evidence to show that LicD2 mutants have a reduced ability to take up choline, have decreased ability to adhere to host cells and are less virulent [1]. These proteins are part of the nucleotidyltransferase superfamily [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Fukutin-related protein	extracellular matrix binding binding protein binding laminin binding cation binding ion binding metal ion binding small molecule binding identical protein binding dystroglycan binding transferase activity catalytic activity phosphotransferase activity, for other substituted phosphate groups transferase activity, transferring phosphorus-containing groups	response to stimulus response to chemical response to xenobiotic stimulus carbohydrate metabolic process polyol metabolic process organic substance metabolic process alditol metabolic process pentitol metabolic process organic hydroxy compound metabolic process primary metabolic process metabolic process alcohol metabolic process small molecule metabolic process developmental process response to stimulus response to chemical response to xenobiotic stimulus carbohydrate metabolic process polyol metabolic process organic substance metabolic process alditol metabolic process pentitol metabolic process organic hydroxy compound metabolic process primary metabolic process metabolic process alcohol metabolic process small molecule metabolic process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development ossification bone mineralization biomineral tissue development tissue development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein tetramerization protein-containing complex assembly cellular process cellular component organization or biogenesis monosaccharide metabolic process pentose metabolic process diaphragm development muscle structure development skeletal muscle organ development respiratory system development muscle organ development system process nervous system process neuromuscular process embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development heart development heart morphogenesis circulatory system development anatomical structure morphogenesis animal organ morphogenesis ribonucleotide catabolic process pyridine nucleotide catabolic process oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process nucleoside phosphate catabolic process organic acid metabolic process nucleobase-containing compound metabolic process glycolytic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process purine ribonucleotide catabolic process phosphorus metabolic process pyridine nucleotide metabolic process nucleoside phosphate metabolic process organonitrogen compound catabolic process nicotinamide nucleotide metabolic process pyruvate metabolic process cellular metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process nucleotide metabolic process nucleobase-containing compound catabolic process organic cyclic compound metabolic process nucleoside diphosphate metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process nucleoside triphosphate metabolic process monocarboxylic acid metabolic process purine ribonucleotide metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process catabolic process ATP metabolic process purine nucleotide metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process nucleotide catabolic process ribonucleoside triphosphate metabolic process purine nucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process organonitrogen compound metabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy organic cyclic compound catabolic process purine-containing compound metabolic process ADP metabolic process organophosphate metabolic process purine ribonucleoside diphosphate metabolic process organic substance catabolic process purine ribonucleoside diphosphate catabolic process reproductive process skeletal muscle cell differentiation cellular developmental process skeletal muscle tissue development muscle cell differentiation myotube differentiation cell differentiation skeletal muscle fiber differentiation muscle tissue development striated muscle cell differentiation creatine metabolic process cellular modified amino acid metabolic process localization localization of cell cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway signaling biological regulation cell communication reelin-mediated signaling pathway signal transduction maintenance of protein location protein localization cellular localization maintenance of location maintenance of location in cell maintenance of protein localization in endoplasmic reticulum maintenance of protein location in cell cellular macromolecule localization macromolecule localization protein localization to organelle maintenance of protein localization in organelle protein localization to endoplasmic reticulum muscle contraction muscle system process adult walking behavior adult locomotory behavior behavior adult behavior locomotory behavior walking behavior neurogenesis gliogenesis glial cell differentiation connective tissue development intracellular signal transduction intracellular signaling cassette phosphatidylinositol 3-kinase/protein kinase B signal transduction sensory organ development eye development visual system development camera-type eye development sensory system development response to activity lipid metabolic process cellular biosynthetic process gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis organic substance biosynthetic process protein processing protein metabolic process macromolecule metabolic process response to corticosteroid response to organic substance response to lipid response to hormone response to steroid hormone response to endogenous stimulus response to glucocorticoid response to organic cyclic compound extracellular matrix organization basement membrane organization extracellular structure organization external encapsulating structure organization cell junction organization cell junction assembly filtration diaphragm assembly cell-cell junction assembly cell-cell junction organization protein import establishment of protein localization nitrogen compound transport transport organic substance transport establishment of localization protein transport respiratory system process respiratory gaseous exchange by respiratory system tissue regeneration skeletal muscle tissue regeneration developmental growth growth regeneration tissue remodeling connective tissue replacement defense response response to stress inflammatory response neuron migration generation of neurons cell migration cell motility protein mannosylation organonitrogen compound biosynthetic process protein modification process carbohydrate derivative biosynthetic process glycoprotein biosynthetic process glycoprotein metabolic process protein glycosylation protein O-linked mannosylation glycosylation mannosylation macromolecule modification macromolecule glycosylation protein O-linked glycosylation oxygen metabolic process response to alcohol response to oxygen-containing compound	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cell periphery sarcolemma plasma membrane membrane rough endoplasmic reticulum membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum intracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cell periphery sarcolemma plasma membrane membrane rough endoplasmic reticulum membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system Golgi apparatus Golgi membrane bounding membrane of organelle organelle membrane extracellular region extracellular space skeletal muscle myofibril intracellular non-membrane-bounded organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex non-membrane-bounded organelle nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR007074	LicD family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q9H9S5	muscular dystrophy-dystroglycanopathy type B5 limb-girdle muscular dystrophy muscular dystrophy-dystroglycanopathy, type A muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 autosomal recessive limb-girdle muscular dystrophy type 2I congenital muscular dystrophy myopathy cardiomyopathy lissencephaly spectrum disorders muscular dystrophy MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2I rhabdomyolysis cataract intellectual disability muscle-eye-brain disease muscular dystrophy-dystroglycanopathy type B5 limb-girdle muscular dystrophy muscular dystrophy-dystroglycanopathy, type A muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 autosomal recessive limb-girdle muscular dystrophy type 2I congenital muscular dystrophy myopathy cardiomyopathy lissencephaly spectrum disorders muscular dystrophy MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 2I rhabdomyolysis cataract intellectual disability muscle-eye-brain disease muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 4 sclerosing cholangitis arthrogryposis B-cell chronic lymphocytic leukemia muscular disease muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1 attention deficit hyperactivity disorder, inattentive type congenital disorder of glycosylation hydrocephalus muscle tissue disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.