6JGN

Crystal structure of barley exohydrolaseI W434H in complex with 4'-nitrophenyl thiolaminaribioside

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6jgna1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	NagZ-like	automated matches	Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ],	SCOPe (2.08)
A	d6jgna2	Alpha and beta proteins (a/b)	Flavodoxin-like	Beta-D-glucan exohydrolase, C-terminal domain-like	automated matches	automated matches	Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ],	SCOPe (2.08)
A	d6jgna3	Artifacts	Tags	Tags	Tags	N-terminal Tags	Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Beta-D-glucan exohydrolase C-terminal domain	8033576	3001349	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	(Trans)glycosidases	8033575	3000313	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_3	e6jgnA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_3	ECOD (1.6)
A	Glyco_hydro_3_C	e6jgnA2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology)	T: Beta-D-glucan exohydrolase, C-terminal domain	F: Glyco_hydro_3_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00933	Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3)	Glycosyl hydrolase family 3 N terminal domain	-	Domain
A	PF01915	Glycosyl hydrolase family 3 C-terminal domain (Glyco_hydro_3_C)	Glycosyl hydrolase family 3 C-terminal domain	This domain is involved in catalysis and may be involved in binding beta-glucan [1]. This domain is found associated with Pfam:PF00933.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1	hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001764	Glycoside hydrolase, family 3, N-terminal	Domain
A	IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily	Homologous Superfamily
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily	Homologous Superfamily
A	IPR002772	Glycoside hydrolase family 3 C-terminal domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.