6H3T
Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 1C11
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | d6h3th_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
D [auth I] | d6h3ti_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B [auth L] | d6h3tl_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
E [auth M] | d6h3tm_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | PF07686 | e6h3tH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth I] | PF07686 | e6h3tI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth L] | PF07686 | e6h3tL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth M] | PF07686 | e6h3tM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth A] | PF03557 | e6h3tA1 | A: alpha complex topology | X: Head domain of SBV glycoprotein Gc (From Topology) | H: Head domain of SBV glycoprotein Gc (From Topology) | T: Head domain of SBV glycoprotein Gc | F: PF03557 | ECOD (1.6) |
F [auth B] | PF03557 | e6h3tB1 | A: alpha complex topology | X: Head domain of SBV glycoprotein Gc (From Topology) | H: Head domain of SBV glycoprotein Gc (From Topology) | T: Head domain of SBV glycoprotein Gc | F: PF03557 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth M] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth H], D [auth I] | scFv 1C11 | VH | Mus musculus (house mouse) | IGHV1S135*01, IGHJ4*01 | V-DOMAIN VH | IG | FV-HEAVY_KAPPA | IMGT (202416-0) |
B [auth L], E [auth M] | scFv 1C11 | V-KAPPA | Mus musculus (house mouse) | IGKV8-30*01, IGKJ1*02 | V-DOMAIN V-KAPPA | IG | FV-HEAVY_KAPPA | IMGT (202416-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H], D [auth I] | Heavy Chain | IGHV1 | - | envelopment polyprotein | SAbDab (2024-04-26) |
B [auth L], E [auth M] | Light Chain | IGKV8 | Kappa | envelopment polyprotein | SAbDab (2024-04-26) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], F [auth B] | PF03557 | Bunyavirus glycoprotein G1 (Bunya_G1) | Bunyavirus glycoprotein G1 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], F [auth B] | IPR005167 | Bunyavirus glycoprotein G1 | Domain |
C [auth A], F [auth B] | IPR005168 | Bunyavirus glycoprotein G2 | Domain |
C [auth A], F [auth B] | IPR026400 | Bunyavirus nonstructural protein NSm | Domain |