Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth D]d6ghdd_ All alpha proteins SAM domain-like Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth E]d6ghde_ All alpha proteins SAM domain-like Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth A]d6ghda_ All alpha proteins SAM domain-like Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth C]d6ghdc_ All alpha proteins SAM domain-like Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Barrier-to-autointegration factor, BAF Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth B]d6ghdb_ All beta proteins Immunoglobulin-like beta-sandwich Lamin A/C globular tail domain Lamin A/C globular tail domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth F]d6ghdf_ All beta proteins Immunoglobulin-like beta-sandwich Lamin A/C globular tail domain Lamin A/C globular tail domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth G]d6ghdg1 All alpha proteins LEM/SAP HeH motif LEM domain LEM domain Inner nuclear membrane protein emerin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth G]d6ghdg2 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd6ghdh_ All alpha proteins LEM/SAP HeH motif LEM domain LEM domain Inner nuclear membrane protein emerin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth D]SCOP2B SuperfamilyBarrier-to-autointegration factor BAF8037724 3000540 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyBarrier-to-autointegration factor BAF8037724 3000540 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyBarrier-to-autointegration factor BAF8037724 3000540 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyBarrier-to-autointegration factor BAF8037724 3000540 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyLamin A/C globular tail domain8055285 3002064 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyLamin A/C globular tail domain8055285 3002064 SCOP2B (2022-06-29)
A [auth G]SCOP2B SuperfamilyLEM domain8043401 3001900 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyLEM domain8043401 3001900 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth D]PF02961e6ghdD1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PF02961ECOD (1.6)
D [auth E]PF02961e6ghdE1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PF02961ECOD (1.6)
E [auth A]PF02961e6ghdA1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PF02961ECOD (1.6)
F [auth C]PF02961e6ghdC1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PF02961ECOD (1.6)
C [auth B]PF00932e6ghdB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00932ECOD (1.6)
G [auth F]PF00932e6ghdF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00932ECOD (1.6)
A [auth G]PF03020e6ghdG1 A: alpha arraysX: LEM/SAP HeH motif-likeH: LEM/SAP HeH motifT: LEM/SAP HeH motifF: PF03020ECOD (1.6)
HPF03020e6ghdH1 A: alpha arraysX: LEM/SAP HeH motif-likeH: LEM/SAP HeH motifT: LEM/SAP HeH motifF: PF03020ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth D],
D [auth E],
E [auth A],
F [auth C]
PF02961Barrier to autointegration factor (BAF)Barrier to autointegration factorThe BAF protein has a SAM-domain-like bundle of orthogonally packed alpha-hairpins - one classic and one pseudo helix-hairpin-helix motif. The protein is involved in the prevention of retroviral DNA integration.Domain
C [auth B],
G [auth F]
PF00932Lamin Tail Domain (LTD)Lamin Tail DomainThe lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin ...The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies [1].
Domain
A [auth G],
H
PF03020LEM domain (LEM)LEM domainThe LEM domain is 50 residues long and is composed of two parallel alpha helices. This domain is found in inner nuclear membrane proteins. It is called the LEM domain after LAP2 Swiss:Q62733, Emerin Swiss:P50402 and Man1.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth D],
D [auth E],
E [auth A],
F [auth C]
Barrier-to-autointegration factor
C [auth B],
G [auth F]
Prelamin-A/C
A [auth G],
H
Emerin

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth D],
D [auth E],
E [auth A],
F [auth C]
PharosO75531
C [auth B],
G [auth F]
PharosP02545
A [auth G],
H
PharosP50402