6F3T
Crystal structure of the human TAF5-TAF6-TAF9 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00400 | e6f3tA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00400 | ECOD (1.6) |
A | PF04494 | e6f3tA2 | A: alpha superhelices | X: Taf5 N-terminal domain-like (From Topology) | H: Taf5 N-terminal domain-like (From Topology) | T: Taf5 N-terminal domain-like | F: PF04494 | ECOD (1.6) |
B | PF00400 | e6f3tB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00400 | ECOD (1.6) |
B | PF04494 | e6f3tB2 | A: alpha superhelices | X: Taf5 N-terminal domain-like (From Topology) | H: Taf5 N-terminal domain-like (From Topology) | T: Taf5 N-terminal domain-like | F: PF04494 | ECOD (1.6) |
C | PF00400 | e6f3tC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00400 | ECOD (1.6) |
C | PF04494 | e6f3tC2 | A: alpha superhelices | X: Taf5 N-terminal domain-like (From Topology) | H: Taf5 N-terminal domain-like (From Topology) | T: Taf5 N-terminal domain-like | F: PF04494 | ECOD (1.6) |
D | PF00400 | e6f3tD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00400 | ECOD (1.6) |
D | PF04494 | e6f3tD2 | A: alpha superhelices | X: Taf5 N-terminal domain-like (From Topology) | H: Taf5 N-terminal domain-like (From Topology) | T: Taf5 N-terminal domain-like | F: PF04494 | ECOD (1.6) |
E | PF02969 | e6f3tE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF02969 | ECOD (1.6) |
G | PF02969 | e6f3tG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF02969 | ECOD (1.6) |
I | PF02969 | e6f3tI1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF02969 | ECOD (1.6) |
K | PF02969 | e6f3tK1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF02969 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04494 | WD40 associated region in TFIID subunit, NTD2 domain (TFIID_NTD2) | WD40 associated region in TFIID subunit, NTD2 domain | - | Family | |
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
PF02969 | TATA box binding protein associated factor (TAF) (TAF) | TATA box binding protein associated factor (TAF) | TAF proteins adopt a histone-like fold. | Domain | |
PF02291 | Transcription initiation factor IID, 31kD subunit (TFIID-31kDa) | Transcription initiation factor IID, 31kD subunit | This family represents the N-terminus of the 31kD subunit (42kD in drosophila) of transcription initiation factor IID (TAFII31). TAFII31 binds to p53, and is an essential requirement for p53 mediated transcription activation. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007582 | TFIID subunit TAF5, NTD2 domain | Domain | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR037264 | TFIID subunit TAF5, NTD2 domain superfamily | Homologous Superfamily | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR001680 | WD40 repeat | Repeat | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
IPR006594 | LIS1 homology motif | Conserved Site | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR011442 | TAF6, C-terminal HEAT repeat domain | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR037796 | Transcription initiation factor TFIID subunit 6 | Family | |
IPR046344 | TAF6, C-terminal HEAT repeat domain superfamily | Homologous Superfamily | |
IPR004823 | TATA box binding protein associated factor (TAF), histone-like fold domain | Domain | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR003162 | Transcription initiation factor TAFII31 | Family |